Gene : Carub.0001s3458 C. rubella v1.1
Defline:  (1 of 1) PTHR21290//PTHR21290:SF32 - SPHINGOMYELIN SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  3458
Name:  ? Carub.0001s3458 Secondary Identifier:  ? PAC:39230315
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3458 0.5kb upstream 0.5kb upstream 2180 true scaffold_1: 14825073-14827252 Capsella rubella
Carub.0001s3458 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14826753-14827252 Capsella rubella
Carub.0001s3458 0.5kb downstream 0.5kb downstream 2180 true scaffold_1: 14824573-14826752 Capsella rubella
Carub.0001s3458 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14824573-14825072 Capsella rubella
Carub.0001s3458 1.0kb upstream 1.0kb upstream 2680 true scaffold_1: 14825073-14827752 Capsella rubella
Carub.0001s3458 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14826753-14827752 Capsella rubella
Carub.0001s3458 1.0kb downstream 1.0kb downstream 2680 true scaffold_1: 14824073-14826752 Capsella rubella
Carub.0001s3458 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14824073-14825072 Capsella rubella
Carub.0001s3458 2.0kb upstream 2.0kb upstream 3680 true scaffold_1: 14825073-14828752 Capsella rubella
Carub.0001s3458 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14826753-14828752 Capsella rubella
Carub.0001s3458 2.0kb downstream 2.0kb downstream 3680 true scaffold_1: 14823073-14826752 Capsella rubella
Carub.0001s3458 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14823073-14825072 Capsella rubella
Carub.0001s3458 5.0kb upstream 5.0kb upstream 6680 true scaffold_1: 14825073-14831752 Capsella rubella
Carub.0001s3458 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14826753-14831752 Capsella rubella
Carub.0001s3458 5.0kb downstream 5.0kb downstream 6680 true scaffold_1: 14820073-14826752 Capsella rubella
Carub.0001s3458 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14820073-14825072 Capsella rubella
Carub.0001s3458 10.0kb upstream 10.0kb upstream 11680 true scaffold_1: 14825073-14836752 Capsella rubella
Carub.0001s3458 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14826753-14836752 Capsella rubella
Carub.0001s3458 10.0kb downstream 10.0kb downstream 11680 true scaffold_1: 14815073-14826752 Capsella rubella
Carub.0001s3458 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14815073-14825072 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041514 5273 Angiosperm View MSA
122364402 5261 Brassicaceae View MSA
123832928 5264 Brassicales-Malvales View MSA
124346334 5266 SBM View MSA
124245000 5268 Malvidae View MSA
124064312 5270 Rosid View MSA
123737084 5271 Pentapetalae View MSA
122786755 5272 Eudicot View MSA
121345949 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain