Gene : Carub.0001s3193 C. rubella v1.1
Defline:  (1 of 146) PF00847 - AP2 domain (AP2) Genomic Order:  3193
Name:  ? Carub.0001s3193 Secondary Identifier:  ? PAC:39231572
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3193 0.5kb upstream 0.5kb upstream 1061 true scaffold_1: 11866219-11867279 Capsella rubella
Carub.0001s3193 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11866219-11866718 Capsella rubella
Carub.0001s3193 0.5kb downstream 0.5kb downstream 1061 true scaffold_1: 11866719-11867779 Capsella rubella
Carub.0001s3193 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11867280-11867779 Capsella rubella
Carub.0001s3193 1.0kb upstream 1.0kb upstream 1561 true scaffold_1: 11865719-11867279 Capsella rubella
Carub.0001s3193 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11865719-11866718 Capsella rubella
Carub.0001s3193 1.0kb downstream 1.0kb downstream 1561 true scaffold_1: 11866719-11868279 Capsella rubella
Carub.0001s3193 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11867280-11868279 Capsella rubella
Carub.0001s3193 2.0kb upstream 2.0kb upstream 2561 true scaffold_1: 11864719-11867279 Capsella rubella
Carub.0001s3193 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11864719-11866718 Capsella rubella
Carub.0001s3193 2.0kb downstream 2.0kb downstream 2561 true scaffold_1: 11866719-11869279 Capsella rubella
Carub.0001s3193 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11867280-11869279 Capsella rubella
Carub.0001s3193 5.0kb upstream 5.0kb upstream 5561 true scaffold_1: 11861719-11867279 Capsella rubella
Carub.0001s3193 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11861719-11866718 Capsella rubella
Carub.0001s3193 5.0kb downstream 5.0kb downstream 5561 true scaffold_1: 11866719-11872279 Capsella rubella
Carub.0001s3193 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11867280-11872279 Capsella rubella
Carub.0001s3193 10.0kb upstream 10.0kb upstream 10561 true scaffold_1: 11856719-11867279 Capsella rubella
Carub.0001s3193 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11856719-11866718 Capsella rubella
Carub.0001s3193 10.0kb downstream 10.0kb downstream 10561 true scaffold_1: 11866719-11877279 Capsella rubella
Carub.0001s3193 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11867280-11877279 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366884 5261 Brassicaceae View MSA
123833759 5264 Brassicales-Malvales View MSA
124336534 5266 SBM View MSA
124252579 5268 Malvidae View MSA
124073354 5270 Rosid View MSA
123741897 5271 Pentapetalae View MSA
122793297 5272 Eudicot View MSA
122049485 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain