Gene : Carub.0001s2985 C. rubella v1.1
Defline:  (1 of 3) PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2985
Name:  ? Carub.0001s2985 Secondary Identifier:  ? PAC:39229937
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2985 0.5kb upstream 0.5kb upstream 2377 true scaffold_1: 10994568-10996944 Capsella rubella
Carub.0001s2985 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10996445-10996944 Capsella rubella
Carub.0001s2985 0.5kb downstream 0.5kb downstream 2377 true scaffold_1: 10994068-10996444 Capsella rubella
Carub.0001s2985 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10994068-10994567 Capsella rubella
Carub.0001s2985 1.0kb upstream 1.0kb upstream 2877 true scaffold_1: 10994568-10997444 Capsella rubella
Carub.0001s2985 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10996445-10997444 Capsella rubella
Carub.0001s2985 1.0kb downstream 1.0kb downstream 2877 true scaffold_1: 10993568-10996444 Capsella rubella
Carub.0001s2985 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10993568-10994567 Capsella rubella
Carub.0001s2985 2.0kb upstream 2.0kb upstream 3877 true scaffold_1: 10994568-10998444 Capsella rubella
Carub.0001s2985 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10996445-10998444 Capsella rubella
Carub.0001s2985 2.0kb downstream 2.0kb downstream 3877 true scaffold_1: 10992568-10996444 Capsella rubella
Carub.0001s2985 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10992568-10994567 Capsella rubella
Carub.0001s2985 5.0kb upstream 5.0kb upstream 6877 true scaffold_1: 10994568-11001444 Capsella rubella
Carub.0001s2985 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10996445-11001444 Capsella rubella
Carub.0001s2985 5.0kb downstream 5.0kb downstream 6877 true scaffold_1: 10989568-10996444 Capsella rubella
Carub.0001s2985 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10989568-10994567 Capsella rubella
Carub.0001s2985 10.0kb upstream 10.0kb upstream 11877 true scaffold_1: 10994568-11006444 Capsella rubella
Carub.0001s2985 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10996445-11006444 Capsella rubella
Carub.0001s2985 10.0kb downstream 10.0kb downstream 11877 true scaffold_1: 10984568-10996444 Capsella rubella
Carub.0001s2985 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10984568-10994567 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361084 5261 Brassicaceae View MSA
123832959 5264 Brassicales-Malvales View MSA
124336880 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain