Gene : Carub.0001s3105 C. rubella v1.1
Defline:  (1 of 3) K02267 - cytochrome c oxidase subunit 6b (COX6B) Genomic Order:  3105
Name:  ? Carub.0001s3105 Secondary Identifier:  ? PAC:39230388
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3781 Capsella rubella pathologic  
Crubella PWY-7279 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3105 0.5kb upstream 0.5kb upstream 1332 true scaffold_1: 11519113-11520444 Capsella rubella
Carub.0001s3105 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11519113-11519612 Capsella rubella
Carub.0001s3105 0.5kb downstream 0.5kb downstream 1332 true scaffold_1: 11519613-11520944 Capsella rubella
Carub.0001s3105 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11520445-11520944 Capsella rubella
Carub.0001s3105 1.0kb upstream 1.0kb upstream 1832 true scaffold_1: 11518613-11520444 Capsella rubella
Carub.0001s3105 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11518613-11519612 Capsella rubella
Carub.0001s3105 1.0kb downstream 1.0kb downstream 1832 true scaffold_1: 11519613-11521444 Capsella rubella
Carub.0001s3105 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11520445-11521444 Capsella rubella
Carub.0001s3105 2.0kb upstream 2.0kb upstream 2832 true scaffold_1: 11517613-11520444 Capsella rubella
Carub.0001s3105 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11517613-11519612 Capsella rubella
Carub.0001s3105 2.0kb downstream 2.0kb downstream 2832 true scaffold_1: 11519613-11522444 Capsella rubella
Carub.0001s3105 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11520445-11522444 Capsella rubella
Carub.0001s3105 5.0kb upstream 5.0kb upstream 5832 true scaffold_1: 11514613-11520444 Capsella rubella
Carub.0001s3105 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11514613-11519612 Capsella rubella
Carub.0001s3105 5.0kb downstream 5.0kb downstream 5832 true scaffold_1: 11519613-11525444 Capsella rubella
Carub.0001s3105 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11520445-11525444 Capsella rubella
Carub.0001s3105 10.0kb upstream 10.0kb upstream 10832 true scaffold_1: 11509613-11520444 Capsella rubella
Carub.0001s3105 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11509613-11519612 Capsella rubella
Carub.0001s3105 10.0kb downstream 10.0kb downstream 10832 true scaffold_1: 11519613-11530444 Capsella rubella
Carub.0001s3105 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11520445-11530444 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379506 5261 Brassicaceae View MSA
123835927 5264 Brassicales-Malvales View MSA
124322107 5266 SBM View MSA
124251643 5268 Malvidae View MSA
124072730 5270 Rosid View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain