Gene : Carub.0001s3111 C. rubella v1.1
Defline:  (1 of 3) K00001 - alcohol dehydrogenase (E1.1.1.1, adh) Genomic Order:  3111
Name:  ? Carub.0001s3111 Secondary Identifier:  ? PAC:39229949
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5486 Capsella rubella pathologic  
Crubella PWY-5751 Capsella rubella pathologic  
Crubella PWY-6333 Capsella rubella pathologic  
Crubella PWY66-21 Capsella rubella pathologic  
Crubella PWY66-389 Capsella rubella pathologic  
Crubella PWY-6802 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3111 0.5kb upstream 0.5kb upstream 3344 true scaffold_1: 11553226-11556569 Capsella rubella
Carub.0001s3111 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11556070-11556569 Capsella rubella
Carub.0001s3111 0.5kb downstream 0.5kb downstream 3344 true scaffold_1: 11552726-11556069 Capsella rubella
Carub.0001s3111 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11552726-11553225 Capsella rubella
Carub.0001s3111 1.0kb upstream 1.0kb upstream 3844 true scaffold_1: 11553226-11557069 Capsella rubella
Carub.0001s3111 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11556070-11557069 Capsella rubella
Carub.0001s3111 1.0kb downstream 1.0kb downstream 3844 true scaffold_1: 11552226-11556069 Capsella rubella
Carub.0001s3111 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11552226-11553225 Capsella rubella
Carub.0001s3111 2.0kb upstream 2.0kb upstream 4844 true scaffold_1: 11553226-11558069 Capsella rubella
Carub.0001s3111 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11556070-11558069 Capsella rubella
Carub.0001s3111 2.0kb downstream 2.0kb downstream 4844 true scaffold_1: 11551226-11556069 Capsella rubella
Carub.0001s3111 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11551226-11553225 Capsella rubella
Carub.0001s3111 5.0kb upstream 5.0kb upstream 7844 true scaffold_1: 11553226-11561069 Capsella rubella
Carub.0001s3111 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11556070-11561069 Capsella rubella
Carub.0001s3111 5.0kb downstream 5.0kb downstream 7844 true scaffold_1: 11548226-11556069 Capsella rubella
Carub.0001s3111 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11548226-11553225 Capsella rubella
Carub.0001s3111 10.0kb upstream 10.0kb upstream 12844 true scaffold_1: 11553226-11566069 Capsella rubella
Carub.0001s3111 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11556070-11566069 Capsella rubella
Carub.0001s3111 10.0kb downstream 10.0kb downstream 12844 true scaffold_1: 11543226-11556069 Capsella rubella
Carub.0001s3111 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11543226-11553225 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360609 5261 Brassicaceae View MSA
123838833 5264 Brassicales-Malvales View MSA
124322503 5266 SBM View MSA
124238784 5268 Malvidae View MSA
124061215 5270 Rosid View MSA
123741103 5271 Pentapetalae View MSA
122790051 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain