Gene : Carub.0001s3120 C. rubella v1.1
Defline:  (1 of 1) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein Genomic Order:  3120
Name:  ? Carub.0001s3120 Secondary Identifier:  ? PAC:39228804
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-622 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3120 0.5kb upstream 0.5kb upstream 3773 true scaffold_1: 11586293-11590065 Capsella rubella
Carub.0001s3120 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11589566-11590065 Capsella rubella
Carub.0001s3120 0.5kb downstream 0.5kb downstream 3773 true scaffold_1: 11585793-11589565 Capsella rubella
Carub.0001s3120 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11585793-11586292 Capsella rubella
Carub.0001s3120 1.0kb upstream 1.0kb upstream 4273 true scaffold_1: 11586293-11590565 Capsella rubella
Carub.0001s3120 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11589566-11590565 Capsella rubella
Carub.0001s3120 1.0kb downstream 1.0kb downstream 4273 true scaffold_1: 11585293-11589565 Capsella rubella
Carub.0001s3120 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11585293-11586292 Capsella rubella
Carub.0001s3120 2.0kb upstream 2.0kb upstream 5273 true scaffold_1: 11586293-11591565 Capsella rubella
Carub.0001s3120 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11589566-11591565 Capsella rubella
Carub.0001s3120 2.0kb downstream 2.0kb downstream 5273 true scaffold_1: 11584293-11589565 Capsella rubella
Carub.0001s3120 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11584293-11586292 Capsella rubella
Carub.0001s3120 5.0kb upstream 5.0kb upstream 8273 true scaffold_1: 11586293-11594565 Capsella rubella
Carub.0001s3120 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11589566-11594565 Capsella rubella
Carub.0001s3120 5.0kb downstream 5.0kb downstream 8273 true scaffold_1: 11581293-11589565 Capsella rubella
Carub.0001s3120 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11581293-11586292 Capsella rubella
Carub.0001s3120 10.0kb upstream 10.0kb upstream 13273 true scaffold_1: 11586293-11599565 Capsella rubella
Carub.0001s3120 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11589566-11599565 Capsella rubella
Carub.0001s3120 10.0kb downstream 10.0kb downstream 13273 true scaffold_1: 11576293-11589565 Capsella rubella
Carub.0001s3120 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11576293-11586292 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374165 5261 Brassicaceae View MSA
123836370 5264 Brassicales-Malvales View MSA
124336942 5266 SBM View MSA
124254033 5268 Malvidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain