Gene : Carub.0001s3121 C. rubella v1.1
Defline:  (1 of 1) PF08488//PF13947 - Wall-associated kinase (WAK) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  3121
Name:  ? Carub.0001s3121 Secondary Identifier:  ? PAC:39228109
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3121 0.5kb upstream 0.5kb upstream 1867 true scaffold_1: 11593154-11595020 Capsella rubella
Carub.0001s3121 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11594521-11595020 Capsella rubella
Carub.0001s3121 0.5kb downstream 0.5kb downstream 1867 true scaffold_1: 11592654-11594520 Capsella rubella
Carub.0001s3121 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11592654-11593153 Capsella rubella
Carub.0001s3121 1.0kb upstream 1.0kb upstream 2367 true scaffold_1: 11593154-11595520 Capsella rubella
Carub.0001s3121 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11594521-11595520 Capsella rubella
Carub.0001s3121 1.0kb downstream 1.0kb downstream 2367 true scaffold_1: 11592154-11594520 Capsella rubella
Carub.0001s3121 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11592154-11593153 Capsella rubella
Carub.0001s3121 2.0kb upstream 2.0kb upstream 3367 true scaffold_1: 11593154-11596520 Capsella rubella
Carub.0001s3121 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11594521-11596520 Capsella rubella
Carub.0001s3121 2.0kb downstream 2.0kb downstream 3367 true scaffold_1: 11591154-11594520 Capsella rubella
Carub.0001s3121 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11591154-11593153 Capsella rubella
Carub.0001s3121 5.0kb upstream 5.0kb upstream 6367 true scaffold_1: 11593154-11599520 Capsella rubella
Carub.0001s3121 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11594521-11599520 Capsella rubella
Carub.0001s3121 5.0kb downstream 5.0kb downstream 6367 true scaffold_1: 11588154-11594520 Capsella rubella
Carub.0001s3121 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11588154-11593153 Capsella rubella
Carub.0001s3121 10.0kb upstream 10.0kb upstream 11367 true scaffold_1: 11593154-11604520 Capsella rubella
Carub.0001s3121 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11594521-11604520 Capsella rubella
Carub.0001s3121 10.0kb downstream 10.0kb downstream 11367 true scaffold_1: 11583154-11594520 Capsella rubella
Carub.0001s3121 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11583154-11593153 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335038 5261 Brassicaceae Singleton cluster - no MSA
123775831 5264 Brassicales-Malvales Singleton cluster - no MSA
124274230 5266 SBM Singleton cluster - no MSA
124254598 5268 Malvidae View MSA
124074660 5270 Rosid View MSA
123751004 5271 Pentapetalae View MSA
122794811 5272 Eudicot View MSA
122051146 5273 Angiosperm View MSA
121312314 5274 Embryophyte View MSA
123349498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain