Gene : Carub.0001s2847 C. rubella v1.1
Defline:  (1 of 1) PF08167 - rRNA processing/ribosome biogenesis (RIX1) Genomic Order:  2847
Name:  ? Carub.0001s2847 Secondary Identifier:  ? PAC:39230772
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2847 0.5kb upstream 0.5kb upstream 5481 true scaffold_1: 10418285-10423765 Capsella rubella
Carub.0001s2847 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10423266-10423765 Capsella rubella
Carub.0001s2847 0.5kb downstream 0.5kb downstream 5481 true scaffold_1: 10417785-10423265 Capsella rubella
Carub.0001s2847 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10417785-10418284 Capsella rubella
Carub.0001s2847 1.0kb upstream 1.0kb upstream 5981 true scaffold_1: 10418285-10424265 Capsella rubella
Carub.0001s2847 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10423266-10424265 Capsella rubella
Carub.0001s2847 1.0kb downstream 1.0kb downstream 5981 true scaffold_1: 10417285-10423265 Capsella rubella
Carub.0001s2847 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10417285-10418284 Capsella rubella
Carub.0001s2847 2.0kb upstream 2.0kb upstream 6981 true scaffold_1: 10418285-10425265 Capsella rubella
Carub.0001s2847 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10423266-10425265 Capsella rubella
Carub.0001s2847 2.0kb downstream 2.0kb downstream 6981 true scaffold_1: 10416285-10423265 Capsella rubella
Carub.0001s2847 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10416285-10418284 Capsella rubella
Carub.0001s2847 5.0kb upstream 5.0kb upstream 9981 true scaffold_1: 10418285-10428265 Capsella rubella
Carub.0001s2847 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10423266-10428265 Capsella rubella
Carub.0001s2847 5.0kb downstream 5.0kb downstream 9981 true scaffold_1: 10413285-10423265 Capsella rubella
Carub.0001s2847 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10413285-10418284 Capsella rubella
Carub.0001s2847 10.0kb upstream 10.0kb upstream 14981 true scaffold_1: 10418285-10433265 Capsella rubella
Carub.0001s2847 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10423266-10433265 Capsella rubella
Carub.0001s2847 10.0kb downstream 10.0kb downstream 14981 true scaffold_1: 10408285-10423265 Capsella rubella
Carub.0001s2847 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10408285-10418284 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368067 5261 Brassicaceae View MSA
123833962 5264 Brassicales-Malvales View MSA
124345504 5266 SBM View MSA
124240318 5268 Malvidae View MSA
124050381 5270 Rosid View MSA
123750218 5271 Pentapetalae View MSA
122787219 5272 Eudicot View MSA
122050850 5273 Angiosperm View MSA
121349026 5274 Embryophyte View MSA
123425273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain