Gene : Carub.0005s2861 C. rubella v1.1
Defline:  (1 of 2) PF13301 - Protein of unknown function (DUF4079) (DUF4079) Genomic Order:  2861
Name:  ? Carub.0005s2861 Secondary Identifier:  ? PAC:39224819
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2861 0.5kb upstream 0.5kb upstream 1896 true scaffold_5: 13153943-13155838 Capsella rubella
Carub.0005s2861 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13153943-13154442 Capsella rubella
Carub.0005s2861 0.5kb downstream 0.5kb downstream 1896 true scaffold_5: 13154443-13156338 Capsella rubella
Carub.0005s2861 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13155839-13156338 Capsella rubella
Carub.0005s2861 1.0kb upstream 1.0kb upstream 2396 true scaffold_5: 13153443-13155838 Capsella rubella
Carub.0005s2861 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13153443-13154442 Capsella rubella
Carub.0005s2861 1.0kb downstream 1.0kb downstream 2396 true scaffold_5: 13154443-13156838 Capsella rubella
Carub.0005s2861 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13155839-13156838 Capsella rubella
Carub.0005s2861 2.0kb upstream 2.0kb upstream 3396 true scaffold_5: 13152443-13155838 Capsella rubella
Carub.0005s2861 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13152443-13154442 Capsella rubella
Carub.0005s2861 2.0kb downstream 2.0kb downstream 3396 true scaffold_5: 13154443-13157838 Capsella rubella
Carub.0005s2861 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13155839-13157838 Capsella rubella
Carub.0005s2861 5.0kb upstream 5.0kb upstream 6396 true scaffold_5: 13149443-13155838 Capsella rubella
Carub.0005s2861 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13149443-13154442 Capsella rubella
Carub.0005s2861 5.0kb downstream 5.0kb downstream 6396 true scaffold_5: 13154443-13160838 Capsella rubella
Carub.0005s2861 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13155839-13160838 Capsella rubella
Carub.0005s2861 10.0kb upstream 10.0kb upstream 11396 true scaffold_5: 13144443-13155838 Capsella rubella
Carub.0005s2861 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13144443-13154442 Capsella rubella
Carub.0005s2861 10.0kb downstream 10.0kb downstream 11396 true scaffold_5: 13154443-13165838 Capsella rubella
Carub.0005s2861 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13155839-13165838 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362956 5261 Brassicaceae View MSA
123828505 5264 Brassicales-Malvales View MSA
124343268 5266 SBM View MSA
124239740 5268 Malvidae View MSA
124060980 5270 Rosid View MSA
123739607 5271 Pentapetalae View MSA
122788628 5272 Eudicot View MSA
122046542 5273 Angiosperm View MSA
121345670 5274 Embryophyte View MSA
123424562 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain