Gene : Carub.0001s2921 C. rubella v1.1
Defline:  (1 of 1) PTHR31235:SF8 - PEROXIDASE 7 Genomic Order:  2921
Name:  ? Carub.0001s2921 Secondary Identifier:  ? PAC:39229375
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5466 Capsella rubella pathologic  
Crubella PWY-7214 Capsella rubella pathologic  
Crubella PWY-7445 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2921 0.5kb upstream 0.5kb upstream 1850 true scaffold_1: 10759523-10761372 Capsella rubella
Carub.0001s2921 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10759523-10760022 Capsella rubella
Carub.0001s2921 0.5kb downstream 0.5kb downstream 1850 true scaffold_1: 10760023-10761872 Capsella rubella
Carub.0001s2921 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10761373-10761872 Capsella rubella
Carub.0001s2921 1.0kb upstream 1.0kb upstream 2350 true scaffold_1: 10759023-10761372 Capsella rubella
Carub.0001s2921 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10759023-10760022 Capsella rubella
Carub.0001s2921 1.0kb downstream 1.0kb downstream 2350 true scaffold_1: 10760023-10762372 Capsella rubella
Carub.0001s2921 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10761373-10762372 Capsella rubella
Carub.0001s2921 2.0kb upstream 2.0kb upstream 3350 true scaffold_1: 10758023-10761372 Capsella rubella
Carub.0001s2921 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10758023-10760022 Capsella rubella
Carub.0001s2921 2.0kb downstream 2.0kb downstream 3350 true scaffold_1: 10760023-10763372 Capsella rubella
Carub.0001s2921 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10761373-10763372 Capsella rubella
Carub.0001s2921 5.0kb upstream 5.0kb upstream 6350 true scaffold_1: 10755023-10761372 Capsella rubella
Carub.0001s2921 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10755023-10760022 Capsella rubella
Carub.0001s2921 5.0kb downstream 5.0kb downstream 6350 true scaffold_1: 10760023-10766372 Capsella rubella
Carub.0001s2921 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10761373-10766372 Capsella rubella
Carub.0001s2921 10.0kb upstream 10.0kb upstream 11350 true scaffold_1: 10750023-10761372 Capsella rubella
Carub.0001s2921 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10750023-10760022 Capsella rubella
Carub.0001s2921 10.0kb downstream 10.0kb downstream 11350 true scaffold_1: 10760023-10771372 Capsella rubella
Carub.0001s2921 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10761373-10771372 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361049 5261 Brassicaceae View MSA
123829210 5264 Brassicales-Malvales View MSA
124347313 5266 SBM View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain