Gene : Carub.0001s2743 C. rubella v1.1
Defline:  (1 of 1) PTHR13464 - TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP Genomic Order:  2743
Name:  ? Carub.0001s2743 Secondary Identifier:  ? PAC:39229167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2743 0.5kb upstream 0.5kb upstream 3108 true scaffold_1: 9977571-9980678 Capsella rubella
Carub.0001s2743 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9977571-9978070 Capsella rubella
Carub.0001s2743 0.5kb downstream 0.5kb downstream 3108 true scaffold_1: 9978071-9981178 Capsella rubella
Carub.0001s2743 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9980679-9981178 Capsella rubella
Carub.0001s2743 1.0kb upstream 1.0kb upstream 3608 true scaffold_1: 9977071-9980678 Capsella rubella
Carub.0001s2743 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9977071-9978070 Capsella rubella
Carub.0001s2743 1.0kb downstream 1.0kb downstream 3608 true scaffold_1: 9978071-9981678 Capsella rubella
Carub.0001s2743 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9980679-9981678 Capsella rubella
Carub.0001s2743 2.0kb upstream 2.0kb upstream 4608 true scaffold_1: 9976071-9980678 Capsella rubella
Carub.0001s2743 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9976071-9978070 Capsella rubella
Carub.0001s2743 2.0kb downstream 2.0kb downstream 4608 true scaffold_1: 9978071-9982678 Capsella rubella
Carub.0001s2743 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9980679-9982678 Capsella rubella
Carub.0001s2743 5.0kb upstream 5.0kb upstream 7608 true scaffold_1: 9973071-9980678 Capsella rubella
Carub.0001s2743 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9973071-9978070 Capsella rubella
Carub.0001s2743 5.0kb downstream 5.0kb downstream 7608 true scaffold_1: 9978071-9985678 Capsella rubella
Carub.0001s2743 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9980679-9985678 Capsella rubella
Carub.0001s2743 10.0kb upstream 10.0kb upstream 12608 true scaffold_1: 9968071-9980678 Capsella rubella
Carub.0001s2743 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9968071-9978070 Capsella rubella
Carub.0001s2743 10.0kb downstream 10.0kb downstream 12608 true scaffold_1: 9978071-9990678 Capsella rubella
Carub.0001s2743 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9980679-9990678 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361317 5261 Brassicaceae View MSA
123833240 5264 Brassicales-Malvales View MSA
124338784 5266 SBM View MSA
124250561 5268 Malvidae View MSA
124067157 5270 Rosid View MSA
123739885 5271 Pentapetalae View MSA
122794219 5272 Eudicot View MSA
122042858 5273 Angiosperm View MSA
123429181 5275 Viridiplantae View MSA
121344834 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain