Gene : Carub.0001s2740 C. rubella v1.1
Defline:  (1 of 6) PF01918 - Alba (Alba) Genomic Order:  2740
Name:  ? Carub.0001s2740 Secondary Identifier:  ? PAC:39230000
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2740 0.5kb upstream 0.5kb upstream 1959 true scaffold_1: 9966949-9968907 Capsella rubella
Carub.0001s2740 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9966949-9967448 Capsella rubella
Carub.0001s2740 0.5kb downstream 0.5kb downstream 1959 true scaffold_1: 9967449-9969407 Capsella rubella
Carub.0001s2740 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9968908-9969407 Capsella rubella
Carub.0001s2740 1.0kb upstream 1.0kb upstream 2459 true scaffold_1: 9966449-9968907 Capsella rubella
Carub.0001s2740 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9966449-9967448 Capsella rubella
Carub.0001s2740 1.0kb downstream 1.0kb downstream 2459 true scaffold_1: 9967449-9969907 Capsella rubella
Carub.0001s2740 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9968908-9969907 Capsella rubella
Carub.0001s2740 2.0kb upstream 2.0kb upstream 3459 true scaffold_1: 9965449-9968907 Capsella rubella
Carub.0001s2740 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9965449-9967448 Capsella rubella
Carub.0001s2740 2.0kb downstream 2.0kb downstream 3459 true scaffold_1: 9967449-9970907 Capsella rubella
Carub.0001s2740 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9968908-9970907 Capsella rubella
Carub.0001s2740 5.0kb upstream 5.0kb upstream 6459 true scaffold_1: 9962449-9968907 Capsella rubella
Carub.0001s2740 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9962449-9967448 Capsella rubella
Carub.0001s2740 5.0kb downstream 5.0kb downstream 6459 true scaffold_1: 9967449-9973907 Capsella rubella
Carub.0001s2740 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9968908-9973907 Capsella rubella
Carub.0001s2740 10.0kb upstream 10.0kb upstream 11459 true scaffold_1: 9957449-9968907 Capsella rubella
Carub.0001s2740 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9957449-9967448 Capsella rubella
Carub.0001s2740 10.0kb downstream 10.0kb downstream 11459 true scaffold_1: 9967449-9978907 Capsella rubella
Carub.0001s2740 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9968908-9978907 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377148 5261 Brassicaceae View MSA
123836105 5264 Brassicales-Malvales View MSA
124345416 5266 SBM View MSA
124246125 5268 Malvidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain