Gene : Carub.0001s3009 C. rubella v1.1
Defline:  (1 of 2) PTHR24015:SF562 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  3009
Name:  ? Carub.0001s3009 Secondary Identifier:  ? PAC:39231523
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3009 0.5kb upstream 0.5kb upstream 1736 true scaffold_1: 11099730-11101465 Capsella rubella
Carub.0001s3009 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11100966-11101465 Capsella rubella
Carub.0001s3009 0.5kb downstream 0.5kb downstream 1736 true scaffold_1: 11099230-11100965 Capsella rubella
Carub.0001s3009 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11099230-11099729 Capsella rubella
Carub.0001s3009 1.0kb upstream 1.0kb upstream 2236 true scaffold_1: 11099730-11101965 Capsella rubella
Carub.0001s3009 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11100966-11101965 Capsella rubella
Carub.0001s3009 1.0kb downstream 1.0kb downstream 2236 true scaffold_1: 11098730-11100965 Capsella rubella
Carub.0001s3009 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11098730-11099729 Capsella rubella
Carub.0001s3009 2.0kb upstream 2.0kb upstream 3236 true scaffold_1: 11099730-11102965 Capsella rubella
Carub.0001s3009 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11100966-11102965 Capsella rubella
Carub.0001s3009 2.0kb downstream 2.0kb downstream 3236 true scaffold_1: 11097730-11100965 Capsella rubella
Carub.0001s3009 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11097730-11099729 Capsella rubella
Carub.0001s3009 5.0kb upstream 5.0kb upstream 6236 true scaffold_1: 11099730-11105965 Capsella rubella
Carub.0001s3009 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11100966-11105965 Capsella rubella
Carub.0001s3009 5.0kb downstream 5.0kb downstream 6236 true scaffold_1: 11094730-11100965 Capsella rubella
Carub.0001s3009 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11094730-11099729 Capsella rubella
Carub.0001s3009 10.0kb upstream 10.0kb upstream 11236 true scaffold_1: 11099730-11110965 Capsella rubella
Carub.0001s3009 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11100966-11110965 Capsella rubella
Carub.0001s3009 10.0kb downstream 10.0kb downstream 11236 true scaffold_1: 11089730-11100965 Capsella rubella
Carub.0001s3009 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11089730-11099729 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365193 5261 Brassicaceae View MSA
123831657 5264 Brassicales-Malvales View MSA
124346189 5266 SBM View MSA
124243885 5268 Malvidae View MSA
124050221 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain