Gene : Carub.0001s3023 C. rubella v1.1
Defline:  (1 of 1) 2.7.4.2 - Phosphomevalonate kinase Genomic Order:  3023
Name:  ? Carub.0001s3023 Secondary Identifier:  ? PAC:39231360
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5910 Capsella rubella pathologic  
Crubella PWY-922 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3023 0.5kb upstream 0.5kb upstream 3897 true scaffold_1: 11159886-11163782 Capsella rubella
Carub.0001s3023 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11159886-11160385 Capsella rubella
Carub.0001s3023 0.5kb downstream 0.5kb downstream 3897 true scaffold_1: 11160386-11164282 Capsella rubella
Carub.0001s3023 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11163783-11164282 Capsella rubella
Carub.0001s3023 1.0kb upstream 1.0kb upstream 4397 true scaffold_1: 11159386-11163782 Capsella rubella
Carub.0001s3023 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11159386-11160385 Capsella rubella
Carub.0001s3023 1.0kb downstream 1.0kb downstream 4397 true scaffold_1: 11160386-11164782 Capsella rubella
Carub.0001s3023 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11163783-11164782 Capsella rubella
Carub.0001s3023 2.0kb upstream 2.0kb upstream 5397 true scaffold_1: 11158386-11163782 Capsella rubella
Carub.0001s3023 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11158386-11160385 Capsella rubella
Carub.0001s3023 2.0kb downstream 2.0kb downstream 5397 true scaffold_1: 11160386-11165782 Capsella rubella
Carub.0001s3023 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11163783-11165782 Capsella rubella
Carub.0001s3023 5.0kb upstream 5.0kb upstream 8397 true scaffold_1: 11155386-11163782 Capsella rubella
Carub.0001s3023 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11155386-11160385 Capsella rubella
Carub.0001s3023 5.0kb downstream 5.0kb downstream 8397 true scaffold_1: 11160386-11168782 Capsella rubella
Carub.0001s3023 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11163783-11168782 Capsella rubella
Carub.0001s3023 10.0kb upstream 10.0kb upstream 13397 true scaffold_1: 11150386-11163782 Capsella rubella
Carub.0001s3023 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11150386-11160385 Capsella rubella
Carub.0001s3023 10.0kb downstream 10.0kb downstream 13397 true scaffold_1: 11160386-11173782 Capsella rubella
Carub.0001s3023 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11163783-11173782 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365721 5261 Brassicaceae View MSA
123834522 5264 Brassicales-Malvales View MSA
124336505 5266 SBM View MSA
124239577 5268 Malvidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain