Gene : Carub.0001s3024 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  3024
Name:  ? Carub.0001s3024 Secondary Identifier:  ? PAC:39227128
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3024 0.5kb upstream 0.5kb upstream 2604 true scaffold_1: 11163905-11166508 Capsella rubella
Carub.0001s3024 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11166009-11166508 Capsella rubella
Carub.0001s3024 0.5kb downstream 0.5kb downstream 2604 true scaffold_1: 11163405-11166008 Capsella rubella
Carub.0001s3024 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11163405-11163904 Capsella rubella
Carub.0001s3024 1.0kb upstream 1.0kb upstream 3104 true scaffold_1: 11163905-11167008 Capsella rubella
Carub.0001s3024 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11166009-11167008 Capsella rubella
Carub.0001s3024 1.0kb downstream 1.0kb downstream 3104 true scaffold_1: 11162905-11166008 Capsella rubella
Carub.0001s3024 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11162905-11163904 Capsella rubella
Carub.0001s3024 2.0kb upstream 2.0kb upstream 4104 true scaffold_1: 11163905-11168008 Capsella rubella
Carub.0001s3024 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11166009-11168008 Capsella rubella
Carub.0001s3024 2.0kb downstream 2.0kb downstream 4104 true scaffold_1: 11161905-11166008 Capsella rubella
Carub.0001s3024 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11161905-11163904 Capsella rubella
Carub.0001s3024 5.0kb upstream 5.0kb upstream 7104 true scaffold_1: 11163905-11171008 Capsella rubella
Carub.0001s3024 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11166009-11171008 Capsella rubella
Carub.0001s3024 5.0kb downstream 5.0kb downstream 7104 true scaffold_1: 11158905-11166008 Capsella rubella
Carub.0001s3024 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11158905-11163904 Capsella rubella
Carub.0001s3024 10.0kb upstream 10.0kb upstream 12104 true scaffold_1: 11163905-11176008 Capsella rubella
Carub.0001s3024 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11166009-11176008 Capsella rubella
Carub.0001s3024 10.0kb downstream 10.0kb downstream 12104 true scaffold_1: 11153905-11166008 Capsella rubella
Carub.0001s3024 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11153905-11163904 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373705 5261 Brassicaceae View MSA
123833353 5264 Brassicales-Malvales View MSA
124338635 5266 SBM View MSA
124239171 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain