Gene : Carub.0001s3022 C. rubella v1.1
Defline:  (1 of 4) PTHR19139:SF144 - AQUAPORIN NIP1-1-RELATED Genomic Order:  3022
Name:  ? Carub.0001s3022 Secondary Identifier:  ? PAC:39230859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3022 0.5kb upstream 0.5kb upstream 1857 true scaffold_1: 11154814-11156670 Capsella rubella
Carub.0001s3022 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11154814-11155313 Capsella rubella
Carub.0001s3022 0.5kb downstream 0.5kb downstream 1857 true scaffold_1: 11155314-11157170 Capsella rubella
Carub.0001s3022 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11156671-11157170 Capsella rubella
Carub.0001s3022 1.0kb upstream 1.0kb upstream 2357 true scaffold_1: 11154314-11156670 Capsella rubella
Carub.0001s3022 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11154314-11155313 Capsella rubella
Carub.0001s3022 1.0kb downstream 1.0kb downstream 2357 true scaffold_1: 11155314-11157670 Capsella rubella
Carub.0001s3022 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11156671-11157670 Capsella rubella
Carub.0001s3022 2.0kb upstream 2.0kb upstream 3357 true scaffold_1: 11153314-11156670 Capsella rubella
Carub.0001s3022 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11153314-11155313 Capsella rubella
Carub.0001s3022 2.0kb downstream 2.0kb downstream 3357 true scaffold_1: 11155314-11158670 Capsella rubella
Carub.0001s3022 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11156671-11158670 Capsella rubella
Carub.0001s3022 5.0kb upstream 5.0kb upstream 6357 true scaffold_1: 11150314-11156670 Capsella rubella
Carub.0001s3022 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11150314-11155313 Capsella rubella
Carub.0001s3022 5.0kb downstream 5.0kb downstream 6357 true scaffold_1: 11155314-11161670 Capsella rubella
Carub.0001s3022 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11156671-11161670 Capsella rubella
Carub.0001s3022 10.0kb upstream 10.0kb upstream 11357 true scaffold_1: 11145314-11156670 Capsella rubella
Carub.0001s3022 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11145314-11155313 Capsella rubella
Carub.0001s3022 10.0kb downstream 10.0kb downstream 11357 true scaffold_1: 11155314-11166670 Capsella rubella
Carub.0001s3022 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11156671-11166670 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510655 5273 Angiosperm View MSA
122366596 5261 Brassicaceae View MSA
123799207 5264 Brassicales-Malvales View MSA
124296753 5266 SBM View MSA
124148819 5268 Malvidae View MSA
123874742 5270 Rosid View MSA
123458671 5271 Pentapetalae View MSA
122494071 5272 Eudicot View MSA
120783742 5274 Embryophyte View MSA
122825717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain