Gene : Carub.0005s2888 C. rubella v1.1
Defline:  (1 of 2) 5.1.1.17 - Isopenicillin-N epimerase Genomic Order:  2888
Name:  ? Carub.0005s2888 Secondary Identifier:  ? PAC:39224703
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2888 0.5kb upstream 0.5kb upstream 2456 true scaffold_5: 13271954-13274409 Capsella rubella
Carub.0005s2888 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13271954-13272453 Capsella rubella
Carub.0005s2888 0.5kb downstream 0.5kb downstream 2456 true scaffold_5: 13272454-13274909 Capsella rubella
Carub.0005s2888 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13274410-13274909 Capsella rubella
Carub.0005s2888 1.0kb upstream 1.0kb upstream 2956 true scaffold_5: 13271454-13274409 Capsella rubella
Carub.0005s2888 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13271454-13272453 Capsella rubella
Carub.0005s2888 1.0kb downstream 1.0kb downstream 2956 true scaffold_5: 13272454-13275409 Capsella rubella
Carub.0005s2888 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13274410-13275409 Capsella rubella
Carub.0005s2888 2.0kb upstream 2.0kb upstream 3956 true scaffold_5: 13270454-13274409 Capsella rubella
Carub.0005s2888 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13270454-13272453 Capsella rubella
Carub.0005s2888 2.0kb downstream 2.0kb downstream 3956 true scaffold_5: 13272454-13276409 Capsella rubella
Carub.0005s2888 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13274410-13276409 Capsella rubella
Carub.0005s2888 5.0kb upstream 5.0kb upstream 6956 true scaffold_5: 13267454-13274409 Capsella rubella
Carub.0005s2888 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13267454-13272453 Capsella rubella
Carub.0005s2888 5.0kb downstream 5.0kb downstream 6956 true scaffold_5: 13272454-13279409 Capsella rubella
Carub.0005s2888 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13274410-13279409 Capsella rubella
Carub.0005s2888 10.0kb upstream 10.0kb upstream 11956 true scaffold_5: 13262454-13274409 Capsella rubella
Carub.0005s2888 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13262454-13272453 Capsella rubella
Carub.0005s2888 10.0kb downstream 10.0kb downstream 11956 true scaffold_5: 13272454-13284409 Capsella rubella
Carub.0005s2888 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13274410-13284409 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370643 5261 Brassicaceae View MSA
123836014 5264 Brassicales-Malvales View MSA
124340484 5266 SBM View MSA
124242863 5268 Malvidae View MSA
124063625 5270 Rosid View MSA
123741535 5271 Pentapetalae View MSA
122792322 5272 Eudicot View MSA
122047079 5273 Angiosperm View MSA
121347897 5274 Embryophyte View MSA
123426680 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain