Gene : Carub.0001s2790 C. rubella v1.1
Defline:  (1 of 1) PTHR33199:SF3 - MACPF DOMAIN-CONTAINING PROTEIN CAD1 Genomic Order:  2790
Name:  ? Carub.0001s2790 Secondary Identifier:  ? PAC:39228676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2790 0.5kb upstream 0.5kb upstream 4246 true scaffold_1: 10143521-10147766 Capsella rubella
Carub.0001s2790 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10147267-10147766 Capsella rubella
Carub.0001s2790 0.5kb downstream 0.5kb downstream 4246 true scaffold_1: 10143021-10147266 Capsella rubella
Carub.0001s2790 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10143021-10143520 Capsella rubella
Carub.0001s2790 1.0kb upstream 1.0kb upstream 4746 true scaffold_1: 10143521-10148266 Capsella rubella
Carub.0001s2790 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10147267-10148266 Capsella rubella
Carub.0001s2790 1.0kb downstream 1.0kb downstream 4746 true scaffold_1: 10142521-10147266 Capsella rubella
Carub.0001s2790 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10142521-10143520 Capsella rubella
Carub.0001s2790 2.0kb upstream 2.0kb upstream 5746 true scaffold_1: 10143521-10149266 Capsella rubella
Carub.0001s2790 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10147267-10149266 Capsella rubella
Carub.0001s2790 2.0kb downstream 2.0kb downstream 5746 true scaffold_1: 10141521-10147266 Capsella rubella
Carub.0001s2790 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10141521-10143520 Capsella rubella
Carub.0001s2790 5.0kb upstream 5.0kb upstream 8746 true scaffold_1: 10143521-10152266 Capsella rubella
Carub.0001s2790 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10147267-10152266 Capsella rubella
Carub.0001s2790 5.0kb downstream 5.0kb downstream 8746 true scaffold_1: 10138521-10147266 Capsella rubella
Carub.0001s2790 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10138521-10143520 Capsella rubella
Carub.0001s2790 10.0kb upstream 10.0kb upstream 13746 true scaffold_1: 10143521-10157266 Capsella rubella
Carub.0001s2790 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10147267-10157266 Capsella rubella
Carub.0001s2790 10.0kb downstream 10.0kb downstream 13746 true scaffold_1: 10133521-10147266 Capsella rubella
Carub.0001s2790 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10133521-10143520 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370667 5261 Brassicaceae View MSA
123830293 5264 Brassicales-Malvales View MSA
124347308 5266 SBM View MSA
124245420 5268 Malvidae View MSA
124063432 5270 Rosid View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain