Gene : Carub.0001s0636 C. rubella v1.1

Defline:  (1 of 3) K02917 - large subunit ribosomal protein L35Ae (RP-L35Ae, RPL35A) Genomic Order:  636
Name:  ? Carub.0001s0636 Secondary Identifier:  ? PAC:39230923

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0636 0.5kb upstream 0.5kb upstream 1472 true scaffold_1: 2231614-2233085 Capsella rubella
Carub.0001s0636 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2231614-2232113 Capsella rubella
Carub.0001s0636 0.5kb downstream 0.5kb downstream 1472 true scaffold_1: 2232114-2233585 Capsella rubella
Carub.0001s0636 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2233086-2233585 Capsella rubella
Carub.0001s0636 1.0kb upstream 1.0kb upstream 1972 true scaffold_1: 2231114-2233085 Capsella rubella
Carub.0001s0636 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2231114-2232113 Capsella rubella
Carub.0001s0636 1.0kb downstream 1.0kb downstream 1972 true scaffold_1: 2232114-2234085 Capsella rubella
Carub.0001s0636 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2233086-2234085 Capsella rubella
Carub.0001s0636 2.0kb upstream 2.0kb upstream 2972 true scaffold_1: 2230114-2233085 Capsella rubella
Carub.0001s0636 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2230114-2232113 Capsella rubella
Carub.0001s0636 2.0kb downstream 2.0kb downstream 2972 true scaffold_1: 2232114-2235085 Capsella rubella
Carub.0001s0636 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2233086-2235085 Capsella rubella
Carub.0001s0636 5.0kb upstream 5.0kb upstream 5972 true scaffold_1: 2227114-2233085 Capsella rubella
Carub.0001s0636 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2227114-2232113 Capsella rubella
Carub.0001s0636 5.0kb downstream 5.0kb downstream 5972 true scaffold_1: 2232114-2238085 Capsella rubella
Carub.0001s0636 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2233086-2238085 Capsella rubella
Carub.0001s0636 10.0kb upstream 10.0kb upstream 10972 true scaffold_1: 2222114-2233085 Capsella rubella
Carub.0001s0636 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2222114-2232113 Capsella rubella
Carub.0001s0636 10.0kb downstream 10.0kb downstream 10972 true scaffold_1: 2232114-2243085 Capsella rubella
Carub.0001s0636 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2233086-2243085 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377092 5261 Brassicaceae View MSA
123838060 5264 Brassicales-Malvales View MSA
124350653 5266 SBM View MSA
124239644 5268 Malvidae View MSA
124063370 5270 Rosid View MSA
123751278 5271 Pentapetalae View MSA
122792399 5272 Eudicot View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain