Gene : Carub.0001s0641 C. rubella v1.1
Defline:  (1 of 3) PTHR13989 - REPLICATION PROTEIN A-RELATED Genomic Order:  641
Name:  ? Carub.0001s0641 Secondary Identifier:  ? PAC:39230411
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0641 0.5kb upstream 0.5kb upstream 1739 true scaffold_1: 2251091-2252829 Capsella rubella
Carub.0001s0641 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2251091-2251590 Capsella rubella
Carub.0001s0641 0.5kb downstream 0.5kb downstream 1739 true scaffold_1: 2251591-2253329 Capsella rubella
Carub.0001s0641 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2252830-2253329 Capsella rubella
Carub.0001s0641 1.0kb upstream 1.0kb upstream 2239 true scaffold_1: 2250591-2252829 Capsella rubella
Carub.0001s0641 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2250591-2251590 Capsella rubella
Carub.0001s0641 1.0kb downstream 1.0kb downstream 2239 true scaffold_1: 2251591-2253829 Capsella rubella
Carub.0001s0641 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2252830-2253829 Capsella rubella
Carub.0001s0641 2.0kb upstream 2.0kb upstream 3239 true scaffold_1: 2249591-2252829 Capsella rubella
Carub.0001s0641 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2249591-2251590 Capsella rubella
Carub.0001s0641 2.0kb downstream 2.0kb downstream 3239 true scaffold_1: 2251591-2254829 Capsella rubella
Carub.0001s0641 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2252830-2254829 Capsella rubella
Carub.0001s0641 5.0kb upstream 5.0kb upstream 6239 true scaffold_1: 2246591-2252829 Capsella rubella
Carub.0001s0641 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2246591-2251590 Capsella rubella
Carub.0001s0641 5.0kb downstream 5.0kb downstream 6239 true scaffold_1: 2251591-2257829 Capsella rubella
Carub.0001s0641 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2252830-2257829 Capsella rubella
Carub.0001s0641 10.0kb upstream 10.0kb upstream 11239 true scaffold_1: 2241591-2252829 Capsella rubella
Carub.0001s0641 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2241591-2251590 Capsella rubella
Carub.0001s0641 10.0kb downstream 10.0kb downstream 11239 true scaffold_1: 2251591-2262829 Capsella rubella
Carub.0001s0641 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2252830-2262829 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368099 5261 Brassicaceae View MSA
123829040 5264 Brassicales-Malvales View MSA
124346592 5266 SBM View MSA
124244081 5268 Malvidae View MSA
124067741 5270 Rosid View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain