Gene : Carub.0001s0655 C. rubella v1.1
Defline:  (1 of 1) PTHR11926:SF374 - UDP-GLYCOSYLTRANSFERASE 71C4 Genomic Order:  655
Name:  ? Carub.0001s0655 Secondary Identifier:  ? PAC:39227435
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5390 Capsella rubella pathologic  
Crubella PWY-7055 Capsella rubella pathologic  
Crubella PWY-7140 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0655 0.5kb upstream 0.5kb upstream 2225 true scaffold_1: 2297763-2299987 Capsella rubella
Carub.0001s0655 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2297763-2298262 Capsella rubella
Carub.0001s0655 0.5kb downstream 0.5kb downstream 2225 true scaffold_1: 2298263-2300487 Capsella rubella
Carub.0001s0655 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2299988-2300487 Capsella rubella
Carub.0001s0655 1.0kb upstream 1.0kb upstream 2725 true scaffold_1: 2297263-2299987 Capsella rubella
Carub.0001s0655 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2297263-2298262 Capsella rubella
Carub.0001s0655 1.0kb downstream 1.0kb downstream 2725 true scaffold_1: 2298263-2300987 Capsella rubella
Carub.0001s0655 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2299988-2300987 Capsella rubella
Carub.0001s0655 2.0kb upstream 2.0kb upstream 3725 true scaffold_1: 2296263-2299987 Capsella rubella
Carub.0001s0655 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2296263-2298262 Capsella rubella
Carub.0001s0655 2.0kb downstream 2.0kb downstream 3725 true scaffold_1: 2298263-2301987 Capsella rubella
Carub.0001s0655 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2299988-2301987 Capsella rubella
Carub.0001s0655 5.0kb upstream 5.0kb upstream 6725 true scaffold_1: 2293263-2299987 Capsella rubella
Carub.0001s0655 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2293263-2298262 Capsella rubella
Carub.0001s0655 5.0kb downstream 5.0kb downstream 6725 true scaffold_1: 2298263-2304987 Capsella rubella
Carub.0001s0655 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2299988-2304987 Capsella rubella
Carub.0001s0655 10.0kb upstream 10.0kb upstream 11725 true scaffold_1: 2288263-2299987 Capsella rubella
Carub.0001s0655 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2288263-2298262 Capsella rubella
Carub.0001s0655 10.0kb downstream 10.0kb downstream 11725 true scaffold_1: 2298263-2309987 Capsella rubella
Carub.0001s0655 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2299988-2309987 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374000 5261 Brassicaceae View MSA
123840802 5264 Brassicales-Malvales View MSA
124349707 5266 SBM View MSA
124247034 5268 Malvidae View MSA
124067865 5270 Rosid View MSA
123749045 5271 Pentapetalae View MSA
122796791 5272 Eudicot View MSA
122049066 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain