Gene : Carub.0001s0409 C. rubella v1.1
Defline:  (1 of 2) PTHR13020//PTHR13020:SF34 - UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING // UBX DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  409
Name:  ? Carub.0001s0409 Secondary Identifier:  ? PAC:39229216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0409 0.5kb upstream 0.5kb upstream 3872 true scaffold_1: 1442065-1445936 Capsella rubella
Carub.0001s0409 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1445437-1445936 Capsella rubella
Carub.0001s0409 0.5kb downstream 0.5kb downstream 3872 true scaffold_1: 1441565-1445436 Capsella rubella
Carub.0001s0409 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1441565-1442064 Capsella rubella
Carub.0001s0409 1.0kb upstream 1.0kb upstream 4372 true scaffold_1: 1442065-1446436 Capsella rubella
Carub.0001s0409 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1445437-1446436 Capsella rubella
Carub.0001s0409 1.0kb downstream 1.0kb downstream 4372 true scaffold_1: 1441065-1445436 Capsella rubella
Carub.0001s0409 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1441065-1442064 Capsella rubella
Carub.0001s0409 2.0kb upstream 2.0kb upstream 5372 true scaffold_1: 1442065-1447436 Capsella rubella
Carub.0001s0409 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1445437-1447436 Capsella rubella
Carub.0001s0409 2.0kb downstream 2.0kb downstream 5372 true scaffold_1: 1440065-1445436 Capsella rubella
Carub.0001s0409 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1440065-1442064 Capsella rubella
Carub.0001s0409 5.0kb upstream 5.0kb upstream 8372 true scaffold_1: 1442065-1450436 Capsella rubella
Carub.0001s0409 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1445437-1450436 Capsella rubella
Carub.0001s0409 5.0kb downstream 5.0kb downstream 8372 true scaffold_1: 1437065-1445436 Capsella rubella
Carub.0001s0409 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1437065-1442064 Capsella rubella
Carub.0001s0409 10.0kb upstream 10.0kb upstream 13372 true scaffold_1: 1442065-1455436 Capsella rubella
Carub.0001s0409 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1445437-1455436 Capsella rubella
Carub.0001s0409 10.0kb downstream 10.0kb downstream 13372 true scaffold_1: 1432065-1445436 Capsella rubella
Carub.0001s0409 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1432065-1442064 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362130 5261 Brassicaceae View MSA
123831007 5264 Brassicales-Malvales View MSA
124341921 5266 SBM View MSA
124240837 5268 Malvidae View MSA
124061214 5270 Rosid View MSA
123738643 5271 Pentapetalae View MSA
122787724 5272 Eudicot View MSA
122045767 5273 Angiosperm View MSA
121347090 5274 Embryophyte View MSA
123424729 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain