Gene : Carub.0001s0564 C. rubella v1.1
Defline:  (1 of 414) PF13041 - PPR repeat family (PPR_2) Genomic Order:  564
Name:  ? Carub.0001s0564 Secondary Identifier:  ? PAC:39229270
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0564 0.5kb upstream 0.5kb upstream 2184 true scaffold_1: 1985434-1987617 Capsella rubella
Carub.0001s0564 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1987118-1987617 Capsella rubella
Carub.0001s0564 0.5kb downstream 0.5kb downstream 2184 true scaffold_1: 1984934-1987117 Capsella rubella
Carub.0001s0564 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1984934-1985433 Capsella rubella
Carub.0001s0564 1.0kb upstream 1.0kb upstream 2684 true scaffold_1: 1985434-1988117 Capsella rubella
Carub.0001s0564 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1987118-1988117 Capsella rubella
Carub.0001s0564 1.0kb downstream 1.0kb downstream 2684 true scaffold_1: 1984434-1987117 Capsella rubella
Carub.0001s0564 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1984434-1985433 Capsella rubella
Carub.0001s0564 2.0kb upstream 2.0kb upstream 3684 true scaffold_1: 1985434-1989117 Capsella rubella
Carub.0001s0564 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1987118-1989117 Capsella rubella
Carub.0001s0564 2.0kb downstream 2.0kb downstream 3684 true scaffold_1: 1983434-1987117 Capsella rubella
Carub.0001s0564 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1983434-1985433 Capsella rubella
Carub.0001s0564 5.0kb upstream 5.0kb upstream 6684 true scaffold_1: 1985434-1992117 Capsella rubella
Carub.0001s0564 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1987118-1992117 Capsella rubella
Carub.0001s0564 5.0kb downstream 5.0kb downstream 6684 true scaffold_1: 1980434-1987117 Capsella rubella
Carub.0001s0564 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1980434-1985433 Capsella rubella
Carub.0001s0564 10.0kb upstream 10.0kb upstream 11684 true scaffold_1: 1985434-1997117 Capsella rubella
Carub.0001s0564 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1987118-1997117 Capsella rubella
Carub.0001s0564 10.0kb downstream 10.0kb downstream 11684 true scaffold_1: 1975434-1987117 Capsella rubella
Carub.0001s0564 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1975434-1985433 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791718 5273 Angiosperm View MSA
122361517 5261 Brassicaceae View MSA
123829887 5264 Brassicales-Malvales View MSA
124339386 5266 SBM View MSA
124240778 5268 Malvidae View MSA
124062312 5270 Rosid View MSA
123736889 5271 Pentapetalae View MSA
122787074 5272 Eudicot View MSA
121063019 5274 Embryophyte View MSA
123102806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain