Gene : Carub.0001s0565 C. rubella v1.1
Defline:  (1 of 1) PTHR31301:SF19 - LOB DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  565
Name:  ? Carub.0001s0565 Secondary Identifier:  ? PAC:39229596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0565 0.5kb upstream 0.5kb upstream 1121 true scaffold_1: 1987533-1988653 Capsella rubella
Carub.0001s0565 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1988154-1988653 Capsella rubella
Carub.0001s0565 0.5kb downstream 0.5kb downstream 1121 true scaffold_1: 1987033-1988153 Capsella rubella
Carub.0001s0565 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1987033-1987532 Capsella rubella
Carub.0001s0565 1.0kb upstream 1.0kb upstream 1621 true scaffold_1: 1987533-1989153 Capsella rubella
Carub.0001s0565 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1988154-1989153 Capsella rubella
Carub.0001s0565 1.0kb downstream 1.0kb downstream 1621 true scaffold_1: 1986533-1988153 Capsella rubella
Carub.0001s0565 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1986533-1987532 Capsella rubella
Carub.0001s0565 2.0kb upstream 2.0kb upstream 2621 true scaffold_1: 1987533-1990153 Capsella rubella
Carub.0001s0565 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1988154-1990153 Capsella rubella
Carub.0001s0565 2.0kb downstream 2.0kb downstream 2621 true scaffold_1: 1985533-1988153 Capsella rubella
Carub.0001s0565 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1985533-1987532 Capsella rubella
Carub.0001s0565 5.0kb upstream 5.0kb upstream 5621 true scaffold_1: 1987533-1993153 Capsella rubella
Carub.0001s0565 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1988154-1993153 Capsella rubella
Carub.0001s0565 5.0kb downstream 5.0kb downstream 5621 true scaffold_1: 1982533-1988153 Capsella rubella
Carub.0001s0565 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1982533-1987532 Capsella rubella
Carub.0001s0565 10.0kb upstream 10.0kb upstream 10621 true scaffold_1: 1987533-1998153 Capsella rubella
Carub.0001s0565 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1988154-1998153 Capsella rubella
Carub.0001s0565 10.0kb downstream 10.0kb downstream 10621 true scaffold_1: 1977533-1988153 Capsella rubella
Carub.0001s0565 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1977533-1987532 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363467 5261 Brassicaceae View MSA
123798550 5264 Brassicales-Malvales View MSA
124348103 5266 SBM View MSA
124245127 5268 Malvidae View MSA
124068850 5270 Rosid View MSA
123748661 5271 Pentapetalae View MSA
122794863 5272 Eudicot View MSA
122043775 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain