Gene : Carub.0001s0578 C. rubella v1.1
Defline:  (1 of 2) PTHR23076//PTHR23076:SF60 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED Genomic Order:  578
Name:  ? Carub.0001s0578 Secondary Identifier:  ? PAC:39230375
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0578 0.5kb upstream 0.5kb upstream 2919 true scaffold_1: 2024279-2027197 Capsella rubella
Carub.0001s0578 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2026698-2027197 Capsella rubella
Carub.0001s0578 0.5kb downstream 0.5kb downstream 2919 true scaffold_1: 2023779-2026697 Capsella rubella
Carub.0001s0578 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2023779-2024278 Capsella rubella
Carub.0001s0578 1.0kb upstream 1.0kb upstream 3419 true scaffold_1: 2024279-2027697 Capsella rubella
Carub.0001s0578 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2026698-2027697 Capsella rubella
Carub.0001s0578 1.0kb downstream 1.0kb downstream 3419 true scaffold_1: 2023279-2026697 Capsella rubella
Carub.0001s0578 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2023279-2024278 Capsella rubella
Carub.0001s0578 2.0kb upstream 2.0kb upstream 4419 true scaffold_1: 2024279-2028697 Capsella rubella
Carub.0001s0578 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2026698-2028697 Capsella rubella
Carub.0001s0578 2.0kb downstream 2.0kb downstream 4419 true scaffold_1: 2022279-2026697 Capsella rubella
Carub.0001s0578 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2022279-2024278 Capsella rubella
Carub.0001s0578 5.0kb upstream 5.0kb upstream 7419 true scaffold_1: 2024279-2031697 Capsella rubella
Carub.0001s0578 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2026698-2031697 Capsella rubella
Carub.0001s0578 5.0kb downstream 5.0kb downstream 7419 true scaffold_1: 2019279-2026697 Capsella rubella
Carub.0001s0578 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2019279-2024278 Capsella rubella
Carub.0001s0578 10.0kb upstream 10.0kb upstream 12419 true scaffold_1: 2024279-2036697 Capsella rubella
Carub.0001s0578 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2026698-2036697 Capsella rubella
Carub.0001s0578 10.0kb downstream 10.0kb downstream 12419 true scaffold_1: 2014279-2026697 Capsella rubella
Carub.0001s0578 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2014279-2024278 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362450 5261 Brassicaceae View MSA
123839956 5264 Brassicales-Malvales View MSA
124341395 5266 SBM View MSA
124239029 5268 Malvidae View MSA
124067047 5270 Rosid View MSA
123736542 5271 Pentapetalae View MSA
122790199 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain