Gene : Carub.0001s0077 C. rubella v1.1
Defline:  (1 of 49) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  77
Name:  ? Carub.0001s0077 Secondary Identifier:  ? PAC:39229881
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0077 0.5kb upstream 0.5kb upstream 3957 true scaffold_1: 272790-276746 Capsella rubella
Carub.0001s0077 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 272790-273289 Capsella rubella
Carub.0001s0077 0.5kb downstream 0.5kb downstream 3957 true scaffold_1: 273290-277246 Capsella rubella
Carub.0001s0077 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 276747-277246 Capsella rubella
Carub.0001s0077 1.0kb upstream 1.0kb upstream 4457 true scaffold_1: 272290-276746 Capsella rubella
Carub.0001s0077 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 272290-273289 Capsella rubella
Carub.0001s0077 1.0kb downstream 1.0kb downstream 4457 true scaffold_1: 273290-277746 Capsella rubella
Carub.0001s0077 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 276747-277746 Capsella rubella
Carub.0001s0077 2.0kb upstream 2.0kb upstream 5457 true scaffold_1: 271290-276746 Capsella rubella
Carub.0001s0077 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 271290-273289 Capsella rubella
Carub.0001s0077 2.0kb downstream 2.0kb downstream 5457 true scaffold_1: 273290-278746 Capsella rubella
Carub.0001s0077 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 276747-278746 Capsella rubella
Carub.0001s0077 5.0kb upstream 5.0kb upstream 8457 true scaffold_1: 268290-276746 Capsella rubella
Carub.0001s0077 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 268290-273289 Capsella rubella
Carub.0001s0077 5.0kb downstream 5.0kb downstream 8457 true scaffold_1: 273290-281746 Capsella rubella
Carub.0001s0077 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 276747-281746 Capsella rubella
Carub.0001s0077 10.0kb upstream 10.0kb upstream 13457 true scaffold_1: 263290-276746 Capsella rubella
Carub.0001s0077 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 263290-273289 Capsella rubella
Carub.0001s0077 10.0kb downstream 10.0kb downstream 13457 true scaffold_1: 273290-286746 Capsella rubella
Carub.0001s0077 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 276747-286746 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378069 5261 Brassicaceae View MSA
123836622 5264 Brassicales-Malvales View MSA
124346787 5266 SBM View MSA
124253995 5268 Malvidae View MSA
124063327 5270 Rosid View MSA
123749565 5271 Pentapetalae View MSA
122795600 5272 Eudicot View MSA
122043658 5273 Angiosperm View MSA
121348077 5274 Embryophyte View MSA
123380721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain