Gene : Carub.0001s0090 C. rubella v1.1
Defline:  (1 of 1) PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  90
Name:  ? Carub.0001s0090 Secondary Identifier:  ? PAC:39227950
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0090 0.5kb upstream 0.5kb upstream 10195 true scaffold_1: 317317-327511 Capsella rubella
Carub.0001s0090 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 317317-317816 Capsella rubella
Carub.0001s0090 0.5kb downstream 0.5kb downstream 10195 true scaffold_1: 317817-328011 Capsella rubella
Carub.0001s0090 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 327512-328011 Capsella rubella
Carub.0001s0090 1.0kb upstream 1.0kb upstream 10695 true scaffold_1: 316817-327511 Capsella rubella
Carub.0001s0090 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 316817-317816 Capsella rubella
Carub.0001s0090 1.0kb downstream 1.0kb downstream 10695 true scaffold_1: 317817-328511 Capsella rubella
Carub.0001s0090 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 327512-328511 Capsella rubella
Carub.0001s0090 2.0kb upstream 2.0kb upstream 11695 true scaffold_1: 315817-327511 Capsella rubella
Carub.0001s0090 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 315817-317816 Capsella rubella
Carub.0001s0090 2.0kb downstream 2.0kb downstream 11695 true scaffold_1: 317817-329511 Capsella rubella
Carub.0001s0090 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 327512-329511 Capsella rubella
Carub.0001s0090 5.0kb upstream 5.0kb upstream 14695 true scaffold_1: 312817-327511 Capsella rubella
Carub.0001s0090 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 312817-317816 Capsella rubella
Carub.0001s0090 5.0kb downstream 5.0kb downstream 14695 true scaffold_1: 317817-332511 Capsella rubella
Carub.0001s0090 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 327512-332511 Capsella rubella
Carub.0001s0090 10.0kb upstream 10.0kb upstream 19695 true scaffold_1: 307817-327511 Capsella rubella
Carub.0001s0090 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 307817-317816 Capsella rubella
Carub.0001s0090 10.0kb downstream 10.0kb downstream 19695 true scaffold_1: 317817-337511 Capsella rubella
Carub.0001s0090 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 327512-337511 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380948 5261 Brassicaceae View MSA
123835711 5264 Brassicales-Malvales View MSA
124345073 5266 SBM View MSA
124241878 5268 Malvidae View MSA
124073724 5270 Rosid View MSA
123753708 5271 Pentapetalae View MSA
122789807 5272 Eudicot View MSA
122044017 5273 Angiosperm View MSA
121347327 5274 Embryophyte View MSA
123427490 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain