Gene : Carub.0001s0134 C. rubella v1.1
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  134
Name:  ? Carub.0001s0134 Secondary Identifier:  ? PAC:39227119
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0134 0.5kb upstream 0.5kb upstream 2840 true scaffold_1: 473591-476430 Capsella rubella
Carub.0001s0134 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 473591-474090 Capsella rubella
Carub.0001s0134 0.5kb downstream 0.5kb downstream 2840 true scaffold_1: 474091-476930 Capsella rubella
Carub.0001s0134 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 476431-476930 Capsella rubella
Carub.0001s0134 1.0kb upstream 1.0kb upstream 3340 true scaffold_1: 473091-476430 Capsella rubella
Carub.0001s0134 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 473091-474090 Capsella rubella
Carub.0001s0134 1.0kb downstream 1.0kb downstream 3340 true scaffold_1: 474091-477430 Capsella rubella
Carub.0001s0134 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 476431-477430 Capsella rubella
Carub.0001s0134 2.0kb upstream 2.0kb upstream 4340 true scaffold_1: 472091-476430 Capsella rubella
Carub.0001s0134 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 472091-474090 Capsella rubella
Carub.0001s0134 2.0kb downstream 2.0kb downstream 4340 true scaffold_1: 474091-478430 Capsella rubella
Carub.0001s0134 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 476431-478430 Capsella rubella
Carub.0001s0134 5.0kb upstream 5.0kb upstream 7340 true scaffold_1: 469091-476430 Capsella rubella
Carub.0001s0134 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 469091-474090 Capsella rubella
Carub.0001s0134 5.0kb downstream 5.0kb downstream 7340 true scaffold_1: 474091-481430 Capsella rubella
Carub.0001s0134 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 476431-481430 Capsella rubella
Carub.0001s0134 10.0kb upstream 10.0kb upstream 12340 true scaffold_1: 464091-476430 Capsella rubella
Carub.0001s0134 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 464091-474090 Capsella rubella
Carub.0001s0134 10.0kb downstream 10.0kb downstream 12340 true scaffold_1: 474091-486430 Capsella rubella
Carub.0001s0134 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 476431-486430 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366253 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain