Gene : Carub.0001s0328 C. rubella v1.1
Defline:  (1 of 1) PTHR22904//PTHR22904:SF312 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  328
Name:  ? Carub.0001s0328 Secondary Identifier:  ? PAC:39227253
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0328 0.5kb upstream 0.5kb upstream 2615 true scaffold_1: 1126046-1128660 Capsella rubella
Carub.0001s0328 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1126046-1126545 Capsella rubella
Carub.0001s0328 0.5kb downstream 0.5kb downstream 2615 true scaffold_1: 1126546-1129160 Capsella rubella
Carub.0001s0328 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1128661-1129160 Capsella rubella
Carub.0001s0328 1.0kb upstream 1.0kb upstream 3115 true scaffold_1: 1125546-1128660 Capsella rubella
Carub.0001s0328 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1125546-1126545 Capsella rubella
Carub.0001s0328 1.0kb downstream 1.0kb downstream 3115 true scaffold_1: 1126546-1129660 Capsella rubella
Carub.0001s0328 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1128661-1129660 Capsella rubella
Carub.0001s0328 2.0kb upstream 2.0kb upstream 4115 true scaffold_1: 1124546-1128660 Capsella rubella
Carub.0001s0328 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1124546-1126545 Capsella rubella
Carub.0001s0328 2.0kb downstream 2.0kb downstream 4115 true scaffold_1: 1126546-1130660 Capsella rubella
Carub.0001s0328 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1128661-1130660 Capsella rubella
Carub.0001s0328 5.0kb upstream 5.0kb upstream 7115 true scaffold_1: 1121546-1128660 Capsella rubella
Carub.0001s0328 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1121546-1126545 Capsella rubella
Carub.0001s0328 5.0kb downstream 5.0kb downstream 7115 true scaffold_1: 1126546-1133660 Capsella rubella
Carub.0001s0328 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1128661-1133660 Capsella rubella
Carub.0001s0328 10.0kb upstream 10.0kb upstream 12115 true scaffold_1: 1116546-1128660 Capsella rubella
Carub.0001s0328 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1116546-1126545 Capsella rubella
Carub.0001s0328 10.0kb downstream 10.0kb downstream 12115 true scaffold_1: 1126546-1138660 Capsella rubella
Carub.0001s0328 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1128661-1138660 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368149 5261 Brassicaceae View MSA
123828408 5264 Brassicales-Malvales View MSA
124339676 5266 SBM View MSA
124254043 5268 Malvidae View MSA
124068096 5270 Rosid View MSA
123752266 5271 Pentapetalae View MSA
122787898 5272 Eudicot View MSA
122046706 5273 Angiosperm View MSA
121343893 5274 Embryophyte View MSA
123425417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain