Gene : Carub.0001s0329 C. rubella v1.1
Defline:  (1 of 2) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) Genomic Order:  329
Name:  ? Carub.0001s0329 Secondary Identifier:  ? PAC:39228157
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0329 0.5kb upstream 0.5kb upstream 5309 true scaffold_1: 1128950-1134258 Capsella rubella
Carub.0001s0329 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1133759-1134258 Capsella rubella
Carub.0001s0329 0.5kb downstream 0.5kb downstream 5309 true scaffold_1: 1128450-1133758 Capsella rubella
Carub.0001s0329 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1128450-1128949 Capsella rubella
Carub.0001s0329 1.0kb upstream 1.0kb upstream 5809 true scaffold_1: 1128950-1134758 Capsella rubella
Carub.0001s0329 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1133759-1134758 Capsella rubella
Carub.0001s0329 1.0kb downstream 1.0kb downstream 5809 true scaffold_1: 1127950-1133758 Capsella rubella
Carub.0001s0329 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1127950-1128949 Capsella rubella
Carub.0001s0329 2.0kb upstream 2.0kb upstream 6809 true scaffold_1: 1128950-1135758 Capsella rubella
Carub.0001s0329 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1133759-1135758 Capsella rubella
Carub.0001s0329 2.0kb downstream 2.0kb downstream 6809 true scaffold_1: 1126950-1133758 Capsella rubella
Carub.0001s0329 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1126950-1128949 Capsella rubella
Carub.0001s0329 5.0kb upstream 5.0kb upstream 9809 true scaffold_1: 1128950-1138758 Capsella rubella
Carub.0001s0329 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1133759-1138758 Capsella rubella
Carub.0001s0329 5.0kb downstream 5.0kb downstream 9809 true scaffold_1: 1123950-1133758 Capsella rubella
Carub.0001s0329 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1123950-1128949 Capsella rubella
Carub.0001s0329 10.0kb upstream 10.0kb upstream 14809 true scaffold_1: 1128950-1143758 Capsella rubella
Carub.0001s0329 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1133759-1143758 Capsella rubella
Carub.0001s0329 10.0kb downstream 10.0kb downstream 14809 true scaffold_1: 1118950-1133758 Capsella rubella
Carub.0001s0329 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1118950-1128949 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380654 5261 Brassicaceae View MSA
123839592 5264 Brassicales-Malvales View MSA
124347683 5266 SBM View MSA
124246956 5268 Malvidae View MSA
124072284 5270 Rosid View MSA
123744540 5271 Pentapetalae View MSA
122788668 5272 Eudicot View MSA
122045725 5273 Angiosperm View MSA
121344183 5274 Embryophyte View MSA
123426396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain