Gene : Carub.0006s0248 C. rubella v1.1
Defline:  (1 of 105) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  248
Name:  ? Carub.0006s0248 Secondary Identifier:  ? PAC:39247398
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0248 0.5kb upstream 0.5kb upstream 992 true scaffold_6: 871780-872771 Capsella rubella
Carub.0006s0248 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 872272-872771 Capsella rubella
Carub.0006s0248 0.5kb downstream 0.5kb downstream 992 true scaffold_6: 871280-872271 Capsella rubella
Carub.0006s0248 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 871280-871779 Capsella rubella
Carub.0006s0248 1.0kb upstream 1.0kb upstream 1492 true scaffold_6: 871780-873271 Capsella rubella
Carub.0006s0248 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 872272-873271 Capsella rubella
Carub.0006s0248 1.0kb downstream 1.0kb downstream 1492 true scaffold_6: 870780-872271 Capsella rubella
Carub.0006s0248 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 870780-871779 Capsella rubella
Carub.0006s0248 2.0kb upstream 2.0kb upstream 2492 true scaffold_6: 871780-874271 Capsella rubella
Carub.0006s0248 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 872272-874271 Capsella rubella
Carub.0006s0248 2.0kb downstream 2.0kb downstream 2492 true scaffold_6: 869780-872271 Capsella rubella
Carub.0006s0248 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 869780-871779 Capsella rubella
Carub.0006s0248 5.0kb upstream 5.0kb upstream 5492 true scaffold_6: 871780-877271 Capsella rubella
Carub.0006s0248 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 872272-877271 Capsella rubella
Carub.0006s0248 5.0kb downstream 5.0kb downstream 5492 true scaffold_6: 866780-872271 Capsella rubella
Carub.0006s0248 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 866780-871779 Capsella rubella
Carub.0006s0248 10.0kb upstream 10.0kb upstream 10492 true scaffold_6: 871780-882271 Capsella rubella
Carub.0006s0248 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 872272-882271 Capsella rubella
Carub.0006s0248 10.0kb downstream 10.0kb downstream 10492 true scaffold_6: 861780-872271 Capsella rubella
Carub.0006s0248 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 861780-871779 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381682 5261 Brassicaceae View MSA
123803372 5264 Brassicales-Malvales View MSA
124300488 5266 SBM View MSA
124252657 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain