Gene : Carub.0001s0672 C. rubella v1.1

Defline:  (1 of 2) PTHR24073//PTHR24073:SF484 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA2B Genomic Order:  672
Name:  ? Carub.0001s0672 Secondary Identifier:  ? PAC:39229061

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0672 0.5kb upstream 0.5kb upstream 1968 true scaffold_1: 2347689-2349656 Capsella rubella
Carub.0001s0672 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2347689-2348188 Capsella rubella
Carub.0001s0672 0.5kb downstream 0.5kb downstream 1968 true scaffold_1: 2348189-2350156 Capsella rubella
Carub.0001s0672 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2349657-2350156 Capsella rubella
Carub.0001s0672 1.0kb upstream 1.0kb upstream 2468 true scaffold_1: 2347189-2349656 Capsella rubella
Carub.0001s0672 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2347189-2348188 Capsella rubella
Carub.0001s0672 1.0kb downstream 1.0kb downstream 2468 true scaffold_1: 2348189-2350656 Capsella rubella
Carub.0001s0672 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2349657-2350656 Capsella rubella
Carub.0001s0672 2.0kb upstream 2.0kb upstream 3468 true scaffold_1: 2346189-2349656 Capsella rubella
Carub.0001s0672 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2346189-2348188 Capsella rubella
Carub.0001s0672 2.0kb downstream 2.0kb downstream 3468 true scaffold_1: 2348189-2351656 Capsella rubella
Carub.0001s0672 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2349657-2351656 Capsella rubella
Carub.0001s0672 5.0kb upstream 5.0kb upstream 6468 true scaffold_1: 2343189-2349656 Capsella rubella
Carub.0001s0672 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2343189-2348188 Capsella rubella
Carub.0001s0672 5.0kb downstream 5.0kb downstream 6468 true scaffold_1: 2348189-2354656 Capsella rubella
Carub.0001s0672 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2349657-2354656 Capsella rubella
Carub.0001s0672 10.0kb upstream 10.0kb upstream 11468 true scaffold_1: 2338189-2349656 Capsella rubella
Carub.0001s0672 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2338189-2348188 Capsella rubella
Carub.0001s0672 10.0kb downstream 10.0kb downstream 11468 true scaffold_1: 2348189-2359656 Capsella rubella
Carub.0001s0672 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2349657-2359656 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379094 5261 Brassicaceae View MSA
123836954 5264 Brassicales-Malvales View MSA
124322229 5266 SBM View MSA
124242133 5268 Malvidae View MSA
124071110 5270 Rosid View MSA
123750874 5271 Pentapetalae View MSA
122796085 5272 Eudicot View MSA
122045103 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain