Gene : Carub.0001s0019 C. rubella v1.1
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  19
Name:  ? Carub.0001s0019 Secondary Identifier:  ? PAC:39229029
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0019 0.5kb upstream 0.5kb upstream 2155 true scaffold_1: 66680-68834 Capsella rubella
Carub.0001s0019 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 66680-67179 Capsella rubella
Carub.0001s0019 0.5kb downstream 0.5kb downstream 2155 true scaffold_1: 67180-69334 Capsella rubella
Carub.0001s0019 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 68835-69334 Capsella rubella
Carub.0001s0019 1.0kb upstream 1.0kb upstream 2655 true scaffold_1: 66180-68834 Capsella rubella
Carub.0001s0019 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 66180-67179 Capsella rubella
Carub.0001s0019 1.0kb downstream 1.0kb downstream 2655 true scaffold_1: 67180-69834 Capsella rubella
Carub.0001s0019 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 68835-69834 Capsella rubella
Carub.0001s0019 2.0kb upstream 2.0kb upstream 3655 true scaffold_1: 65180-68834 Capsella rubella
Carub.0001s0019 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 65180-67179 Capsella rubella
Carub.0001s0019 2.0kb downstream 2.0kb downstream 3655 true scaffold_1: 67180-70834 Capsella rubella
Carub.0001s0019 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 68835-70834 Capsella rubella
Carub.0001s0019 5.0kb upstream 5.0kb upstream 6655 true scaffold_1: 62180-68834 Capsella rubella
Carub.0001s0019 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 62180-67179 Capsella rubella
Carub.0001s0019 5.0kb downstream 5.0kb downstream 6655 true scaffold_1: 67180-73834 Capsella rubella
Carub.0001s0019 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 68835-73834 Capsella rubella
Carub.0001s0019 10.0kb upstream 10.0kb upstream 11655 true scaffold_1: 57180-68834 Capsella rubella
Carub.0001s0019 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 57180-67179 Capsella rubella
Carub.0001s0019 10.0kb downstream 10.0kb downstream 11655 true scaffold_1: 67180-78834 Capsella rubella
Carub.0001s0019 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 68835-78834 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376828 5261 Brassicaceae View MSA
123828982 5264 Brassicales-Malvales View MSA
124336806 5266 SBM View MSA
124239117 5268 Malvidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain