Gene : Carub.0001s0224 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  224
Name:  ? Carub.0001s0224 Secondary Identifier:  ? PAC:39227689
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0224 0.5kb upstream 0.5kb upstream 2885 true scaffold_1: 784385-787269 Capsella rubella
Carub.0001s0224 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 786770-787269 Capsella rubella
Carub.0001s0224 0.5kb downstream 0.5kb downstream 2885 true scaffold_1: 783885-786769 Capsella rubella
Carub.0001s0224 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 783885-784384 Capsella rubella
Carub.0001s0224 1.0kb upstream 1.0kb upstream 3385 true scaffold_1: 784385-787769 Capsella rubella
Carub.0001s0224 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 786770-787769 Capsella rubella
Carub.0001s0224 1.0kb downstream 1.0kb downstream 3385 true scaffold_1: 783385-786769 Capsella rubella
Carub.0001s0224 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 783385-784384 Capsella rubella
Carub.0001s0224 2.0kb upstream 2.0kb upstream 4385 true scaffold_1: 784385-788769 Capsella rubella
Carub.0001s0224 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 786770-788769 Capsella rubella
Carub.0001s0224 2.0kb downstream 2.0kb downstream 4385 true scaffold_1: 782385-786769 Capsella rubella
Carub.0001s0224 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 782385-784384 Capsella rubella
Carub.0001s0224 5.0kb upstream 5.0kb upstream 7385 true scaffold_1: 784385-791769 Capsella rubella
Carub.0001s0224 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 786770-791769 Capsella rubella
Carub.0001s0224 5.0kb downstream 5.0kb downstream 7385 true scaffold_1: 779385-786769 Capsella rubella
Carub.0001s0224 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 779385-784384 Capsella rubella
Carub.0001s0224 10.0kb upstream 10.0kb upstream 12385 true scaffold_1: 784385-796769 Capsella rubella
Carub.0001s0224 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 786770-796769 Capsella rubella
Carub.0001s0224 10.0kb downstream 10.0kb downstream 12385 true scaffold_1: 774385-786769 Capsella rubella
Carub.0001s0224 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 774385-784384 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375160 5261 Brassicaceae View MSA
123830576 5264 Brassicales-Malvales View MSA
124339257 5266 SBM View MSA
124241189 5268 Malvidae View MSA
124066657 5270 Rosid View MSA
123748641 5271 Pentapetalae View MSA
122794556 5272 Eudicot View MSA
122048850 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351271 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain