Gene : Carub.0006s0274 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  274
Name:  ? Carub.0006s0274 Secondary Identifier:  ? PAC:39246387
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0274 0.5kb upstream 0.5kb upstream 3285 true scaffold_6: 995655-998939 Capsella rubella
Carub.0006s0274 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 998440-998939 Capsella rubella
Carub.0006s0274 0.5kb downstream 0.5kb downstream 3285 true scaffold_6: 995155-998439 Capsella rubella
Carub.0006s0274 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 995155-995654 Capsella rubella
Carub.0006s0274 1.0kb upstream 1.0kb upstream 3785 true scaffold_6: 995655-999439 Capsella rubella
Carub.0006s0274 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 998440-999439 Capsella rubella
Carub.0006s0274 1.0kb downstream 1.0kb downstream 3785 true scaffold_6: 994655-998439 Capsella rubella
Carub.0006s0274 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 994655-995654 Capsella rubella
Carub.0006s0274 2.0kb upstream 2.0kb upstream 4785 true scaffold_6: 995655-1000439 Capsella rubella
Carub.0006s0274 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 998440-1000439 Capsella rubella
Carub.0006s0274 2.0kb downstream 2.0kb downstream 4785 true scaffold_6: 993655-998439 Capsella rubella
Carub.0006s0274 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 993655-995654 Capsella rubella
Carub.0006s0274 5.0kb upstream 5.0kb upstream 7785 true scaffold_6: 995655-1003439 Capsella rubella
Carub.0006s0274 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 998440-1003439 Capsella rubella
Carub.0006s0274 5.0kb downstream 5.0kb downstream 7785 true scaffold_6: 990655-998439 Capsella rubella
Carub.0006s0274 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 990655-995654 Capsella rubella
Carub.0006s0274 10.0kb upstream 10.0kb upstream 12785 true scaffold_6: 995655-1008439 Capsella rubella
Carub.0006s0274 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 998440-1008439 Capsella rubella
Carub.0006s0274 10.0kb downstream 10.0kb downstream 12785 true scaffold_6: 985655-998439 Capsella rubella
Carub.0006s0274 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 985655-995654 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026515 5273 Angiosperm View MSA
122364709 5261 Brassicaceae View MSA
123829548 5264 Brassicales-Malvales View MSA
124339928 5266 SBM View MSA
124240821 5268 Malvidae View MSA
124069148 5270 Rosid View MSA
123736383 5271 Pentapetalae View MSA
122786219 5272 Eudicot View MSA
121296364 5274 Embryophyte View MSA
123334542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain