Gene : Carub.0001s0003 C. rubella v1.1
Defline:  (1 of 41) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3
Name:  ? Carub.0001s0003 Secondary Identifier:  ? PAC:39229263
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0003 0.5kb upstream 0.5kb upstream 2260 true scaffold_1: 7089-9348 Capsella rubella
Carub.0001s0003 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7089-7588 Capsella rubella
Carub.0001s0003 0.5kb downstream 0.5kb downstream 2260 true scaffold_1: 7589-9848 Capsella rubella
Carub.0001s0003 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9349-9848 Capsella rubella
Carub.0001s0003 1.0kb upstream 1.0kb upstream 2760 true scaffold_1: 6589-9348 Capsella rubella
Carub.0001s0003 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6589-7588 Capsella rubella
Carub.0001s0003 1.0kb downstream 1.0kb downstream 2760 true scaffold_1: 7589-10348 Capsella rubella
Carub.0001s0003 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9349-10348 Capsella rubella
Carub.0001s0003 2.0kb upstream 2.0kb upstream 3760 true scaffold_1: 5589-9348 Capsella rubella
Carub.0001s0003 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5589-7588 Capsella rubella
Carub.0001s0003 2.0kb downstream 2.0kb downstream 3760 true scaffold_1: 7589-11348 Capsella rubella
Carub.0001s0003 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9349-11348 Capsella rubella
Carub.0001s0003 5.0kb upstream 5.0kb upstream 6760 true scaffold_1: 2589-9348 Capsella rubella
Carub.0001s0003 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2589-7588 Capsella rubella
Carub.0001s0003 5.0kb downstream 5.0kb downstream 6760 true scaffold_1: 7589-14348 Capsella rubella
Carub.0001s0003 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9349-14348 Capsella rubella
Carub.0001s0003 10.0kb upstream 10.0kb upstream 9348 true scaffold_1: 1-9348 Capsella rubella
Carub.0001s0003 10.0kb upstream 10.0kb upstream 7588 false scaffold_1: 1-7588 Capsella rubella
Carub.0001s0003 10.0kb downstream 10.0kb downstream 11760 true scaffold_1: 7589-19348 Capsella rubella
Carub.0001s0003 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9349-19348 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374410 5261 Brassicaceae View MSA
123832410 5264 Brassicales-Malvales View MSA
124343408 5266 SBM View MSA
124244943 5268 Malvidae View MSA
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain