Gene : Carub.0001s1495 C. rubella v1.1
Defline:  (1 of 1) K13114 - pinin (PNN) Genomic Order:  1495
Name:  ? Carub.0001s1495 Secondary Identifier:  ? PAC:39228814
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1495 0.5kb upstream 0.5kb upstream 3257 true scaffold_1: 5297482-5300738 Capsella rubella
Carub.0001s1495 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5300239-5300738 Capsella rubella
Carub.0001s1495 0.5kb downstream 0.5kb downstream 3257 true scaffold_1: 5296982-5300238 Capsella rubella
Carub.0001s1495 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5296982-5297481 Capsella rubella
Carub.0001s1495 1.0kb upstream 1.0kb upstream 3757 true scaffold_1: 5297482-5301238 Capsella rubella
Carub.0001s1495 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5300239-5301238 Capsella rubella
Carub.0001s1495 1.0kb downstream 1.0kb downstream 3757 true scaffold_1: 5296482-5300238 Capsella rubella
Carub.0001s1495 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5296482-5297481 Capsella rubella
Carub.0001s1495 2.0kb upstream 2.0kb upstream 4757 true scaffold_1: 5297482-5302238 Capsella rubella
Carub.0001s1495 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5300239-5302238 Capsella rubella
Carub.0001s1495 2.0kb downstream 2.0kb downstream 4757 true scaffold_1: 5295482-5300238 Capsella rubella
Carub.0001s1495 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5295482-5297481 Capsella rubella
Carub.0001s1495 5.0kb upstream 5.0kb upstream 7757 true scaffold_1: 5297482-5305238 Capsella rubella
Carub.0001s1495 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5300239-5305238 Capsella rubella
Carub.0001s1495 5.0kb downstream 5.0kb downstream 7757 true scaffold_1: 5292482-5300238 Capsella rubella
Carub.0001s1495 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5292482-5297481 Capsella rubella
Carub.0001s1495 10.0kb upstream 10.0kb upstream 12757 true scaffold_1: 5297482-5310238 Capsella rubella
Carub.0001s1495 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5300239-5310238 Capsella rubella
Carub.0001s1495 10.0kb downstream 10.0kb downstream 12757 true scaffold_1: 5287482-5300238 Capsella rubella
Carub.0001s1495 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5287482-5297481 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363318 5261 Brassicaceae View MSA
123832772 5264 Brassicales-Malvales View MSA
124342581 5266 SBM View MSA
124239356 5268 Malvidae View MSA
124061315 5270 Rosid View MSA
123738009 5271 Pentapetalae View MSA
122786181 5272 Eudicot View MSA
122046264 5273 Angiosperm View MSA
121351481 5274 Embryophyte View MSA
123426416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain