Gene : Carub.0001s1508 C. rubella v1.1
Defline:  (1 of 2) PTHR13780//PTHR13780:SF51 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-LIKE PV42A-RELATED Genomic Order:  1508
Name:  ? Carub.0001s1508 Secondary Identifier:  ? PAC:39228290
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1508 0.5kb upstream 0.5kb upstream 2067 true scaffold_1: 5343318-5345384 Capsella rubella
Carub.0001s1508 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5343318-5343817 Capsella rubella
Carub.0001s1508 0.5kb downstream 0.5kb downstream 2067 true scaffold_1: 5343818-5345884 Capsella rubella
Carub.0001s1508 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5345385-5345884 Capsella rubella
Carub.0001s1508 1.0kb upstream 1.0kb upstream 2567 true scaffold_1: 5342818-5345384 Capsella rubella
Carub.0001s1508 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5342818-5343817 Capsella rubella
Carub.0001s1508 1.0kb downstream 1.0kb downstream 2567 true scaffold_1: 5343818-5346384 Capsella rubella
Carub.0001s1508 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5345385-5346384 Capsella rubella
Carub.0001s1508 2.0kb upstream 2.0kb upstream 3567 true scaffold_1: 5341818-5345384 Capsella rubella
Carub.0001s1508 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5341818-5343817 Capsella rubella
Carub.0001s1508 2.0kb downstream 2.0kb downstream 3567 true scaffold_1: 5343818-5347384 Capsella rubella
Carub.0001s1508 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5345385-5347384 Capsella rubella
Carub.0001s1508 5.0kb upstream 5.0kb upstream 6567 true scaffold_1: 5338818-5345384 Capsella rubella
Carub.0001s1508 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5338818-5343817 Capsella rubella
Carub.0001s1508 5.0kb downstream 5.0kb downstream 6567 true scaffold_1: 5343818-5350384 Capsella rubella
Carub.0001s1508 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5345385-5350384 Capsella rubella
Carub.0001s1508 10.0kb upstream 10.0kb upstream 11567 true scaffold_1: 5333818-5345384 Capsella rubella
Carub.0001s1508 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5333818-5343817 Capsella rubella
Carub.0001s1508 10.0kb downstream 10.0kb downstream 11567 true scaffold_1: 5343818-5355384 Capsella rubella
Carub.0001s1508 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5345385-5355384 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375193 5261 Brassicaceae View MSA
123834102 5264 Brassicales-Malvales View MSA
124348504 5266 SBM View MSA
124243924 5268 Malvidae View MSA
124061084 5270 Rosid View MSA
123738875 5271 Pentapetalae View MSA
122797482 5272 Eudicot View MSA
122042639 5273 Angiosperm View MSA
121347644 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain