Gene : Carub.0001s1544 C. rubella v1.1
Defline:  (1 of 1) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  1544
Name:  ? Carub.0001s1544 Secondary Identifier:  ? PAC:39231481
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1544 0.5kb upstream 0.5kb upstream 4577 true scaffold_1: 5448329-5452905 Capsella rubella
Carub.0001s1544 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5448329-5448828 Capsella rubella
Carub.0001s1544 0.5kb downstream 0.5kb downstream 4577 true scaffold_1: 5448829-5453405 Capsella rubella
Carub.0001s1544 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5452906-5453405 Capsella rubella
Carub.0001s1544 1.0kb upstream 1.0kb upstream 5077 true scaffold_1: 5447829-5452905 Capsella rubella
Carub.0001s1544 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5447829-5448828 Capsella rubella
Carub.0001s1544 1.0kb downstream 1.0kb downstream 5077 true scaffold_1: 5448829-5453905 Capsella rubella
Carub.0001s1544 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5452906-5453905 Capsella rubella
Carub.0001s1544 2.0kb upstream 2.0kb upstream 6077 true scaffold_1: 5446829-5452905 Capsella rubella
Carub.0001s1544 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5446829-5448828 Capsella rubella
Carub.0001s1544 2.0kb downstream 2.0kb downstream 6077 true scaffold_1: 5448829-5454905 Capsella rubella
Carub.0001s1544 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5452906-5454905 Capsella rubella
Carub.0001s1544 5.0kb upstream 5.0kb upstream 9077 true scaffold_1: 5443829-5452905 Capsella rubella
Carub.0001s1544 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5443829-5448828 Capsella rubella
Carub.0001s1544 5.0kb downstream 5.0kb downstream 9077 true scaffold_1: 5448829-5457905 Capsella rubella
Carub.0001s1544 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5452906-5457905 Capsella rubella
Carub.0001s1544 10.0kb upstream 10.0kb upstream 14077 true scaffold_1: 5438829-5452905 Capsella rubella
Carub.0001s1544 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5438829-5448828 Capsella rubella
Carub.0001s1544 10.0kb downstream 10.0kb downstream 14077 true scaffold_1: 5448829-5462905 Capsella rubella
Carub.0001s1544 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5452906-5462905 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369390 5261 Brassicaceae View MSA
123832849 5264 Brassicales-Malvales View MSA
124348219 5266 SBM View MSA
124245079 5268 Malvidae View MSA
124069711 5270 Rosid View MSA
123738687 5271 Pentapetalae View MSA
122788582 5272 Eudicot View MSA
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain