Gene : Carub.0001s1536 C. rubella v1.1
Defline:  (1 of 4) PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1536
Name:  ? Carub.0001s1536 Secondary Identifier:  ? PAC:39230346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1536 0.5kb upstream 0.5kb upstream 1344 true scaffold_1: 5432996-5434339 Capsella rubella
Carub.0001s1536 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5432996-5433495 Capsella rubella
Carub.0001s1536 0.5kb downstream 0.5kb downstream 1344 true scaffold_1: 5433496-5434839 Capsella rubella
Carub.0001s1536 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5434340-5434839 Capsella rubella
Carub.0001s1536 1.0kb upstream 1.0kb upstream 1844 true scaffold_1: 5432496-5434339 Capsella rubella
Carub.0001s1536 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5432496-5433495 Capsella rubella
Carub.0001s1536 1.0kb downstream 1.0kb downstream 1844 true scaffold_1: 5433496-5435339 Capsella rubella
Carub.0001s1536 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5434340-5435339 Capsella rubella
Carub.0001s1536 2.0kb upstream 2.0kb upstream 2844 true scaffold_1: 5431496-5434339 Capsella rubella
Carub.0001s1536 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5431496-5433495 Capsella rubella
Carub.0001s1536 2.0kb downstream 2.0kb downstream 2844 true scaffold_1: 5433496-5436339 Capsella rubella
Carub.0001s1536 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5434340-5436339 Capsella rubella
Carub.0001s1536 5.0kb upstream 5.0kb upstream 5844 true scaffold_1: 5428496-5434339 Capsella rubella
Carub.0001s1536 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5428496-5433495 Capsella rubella
Carub.0001s1536 5.0kb downstream 5.0kb downstream 5844 true scaffold_1: 5433496-5439339 Capsella rubella
Carub.0001s1536 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5434340-5439339 Capsella rubella
Carub.0001s1536 10.0kb upstream 10.0kb upstream 10844 true scaffold_1: 5423496-5434339 Capsella rubella
Carub.0001s1536 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5423496-5433495 Capsella rubella
Carub.0001s1536 10.0kb downstream 10.0kb downstream 10844 true scaffold_1: 5433496-5444339 Capsella rubella
Carub.0001s1536 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5434340-5444339 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781833 5273 Angiosperm View MSA
122335213 5261 Brassicaceae Singleton cluster - no MSA
123775995 5264 Brassicales-Malvales Singleton cluster - no MSA
124274393 5266 SBM Singleton cluster - no MSA
124129884 5268 Malvidae Singleton cluster - no MSA
123858388 5270 Rosid Singleton cluster - no MSA
123750713 5271 Pentapetalae View MSA
122773813 5272 Eudicot View MSA
121053394 5274 Embryophyte View MSA
123093417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain