Gene : Carub.0001s1554 C. rubella v1.1
Defline:  (1 of 5) PF07647 - SAM domain (Sterile alpha motif) (SAM_2) Genomic Order:  1554
Name:  ? Carub.0001s1554 Secondary Identifier:  ? PAC:39228738
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1554 0.5kb upstream 0.5kb upstream 1118 true scaffold_1: 5490638-5491755 Capsella rubella
Carub.0001s1554 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5490638-5491137 Capsella rubella
Carub.0001s1554 0.5kb downstream 0.5kb downstream 1118 true scaffold_1: 5491138-5492255 Capsella rubella
Carub.0001s1554 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5491756-5492255 Capsella rubella
Carub.0001s1554 1.0kb upstream 1.0kb upstream 1618 true scaffold_1: 5490138-5491755 Capsella rubella
Carub.0001s1554 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5490138-5491137 Capsella rubella
Carub.0001s1554 1.0kb downstream 1.0kb downstream 1618 true scaffold_1: 5491138-5492755 Capsella rubella
Carub.0001s1554 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5491756-5492755 Capsella rubella
Carub.0001s1554 2.0kb upstream 2.0kb upstream 2618 true scaffold_1: 5489138-5491755 Capsella rubella
Carub.0001s1554 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5489138-5491137 Capsella rubella
Carub.0001s1554 2.0kb downstream 2.0kb downstream 2618 true scaffold_1: 5491138-5493755 Capsella rubella
Carub.0001s1554 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5491756-5493755 Capsella rubella
Carub.0001s1554 5.0kb upstream 5.0kb upstream 5618 true scaffold_1: 5486138-5491755 Capsella rubella
Carub.0001s1554 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5486138-5491137 Capsella rubella
Carub.0001s1554 5.0kb downstream 5.0kb downstream 5618 true scaffold_1: 5491138-5496755 Capsella rubella
Carub.0001s1554 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5491756-5496755 Capsella rubella
Carub.0001s1554 10.0kb upstream 10.0kb upstream 10618 true scaffold_1: 5481138-5491755 Capsella rubella
Carub.0001s1554 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5481138-5491137 Capsella rubella
Carub.0001s1554 10.0kb downstream 10.0kb downstream 10618 true scaffold_1: 5491138-5501755 Capsella rubella
Carub.0001s1554 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5491756-5501755 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361786 5261 Brassicaceae View MSA
123839675 5264 Brassicales-Malvales View MSA
124344189 5266 SBM View MSA
124242329 5268 Malvidae View MSA
124063066 5270 Rosid View MSA
123745428 5271 Pentapetalae View MSA
122789154 5272 Eudicot View MSA
122048035 5273 Angiosperm View MSA
121310835 5274 Embryophyte View MSA
123348222 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain