Gene : Carub.0001s1395 C. rubella v1.1
Defline:  (1 of 1) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  1395
Name:  ? Carub.0001s1395 Secondary Identifier:  ? PAC:39227022
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1395 0.5kb upstream 0.5kb upstream 2821 true scaffold_1: 4956070-4958890 Capsella rubella
Carub.0001s1395 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4958391-4958890 Capsella rubella
Carub.0001s1395 0.5kb downstream 0.5kb downstream 2821 true scaffold_1: 4955570-4958390 Capsella rubella
Carub.0001s1395 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4955570-4956069 Capsella rubella
Carub.0001s1395 1.0kb upstream 1.0kb upstream 3321 true scaffold_1: 4956070-4959390 Capsella rubella
Carub.0001s1395 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4958391-4959390 Capsella rubella
Carub.0001s1395 1.0kb downstream 1.0kb downstream 3321 true scaffold_1: 4955070-4958390 Capsella rubella
Carub.0001s1395 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4955070-4956069 Capsella rubella
Carub.0001s1395 2.0kb upstream 2.0kb upstream 4321 true scaffold_1: 4956070-4960390 Capsella rubella
Carub.0001s1395 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4958391-4960390 Capsella rubella
Carub.0001s1395 2.0kb downstream 2.0kb downstream 4321 true scaffold_1: 4954070-4958390 Capsella rubella
Carub.0001s1395 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4954070-4956069 Capsella rubella
Carub.0001s1395 5.0kb upstream 5.0kb upstream 7321 true scaffold_1: 4956070-4963390 Capsella rubella
Carub.0001s1395 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4958391-4963390 Capsella rubella
Carub.0001s1395 5.0kb downstream 5.0kb downstream 7321 true scaffold_1: 4951070-4958390 Capsella rubella
Carub.0001s1395 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4951070-4956069 Capsella rubella
Carub.0001s1395 10.0kb upstream 10.0kb upstream 12321 true scaffold_1: 4956070-4968390 Capsella rubella
Carub.0001s1395 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4958391-4968390 Capsella rubella
Carub.0001s1395 10.0kb downstream 10.0kb downstream 12321 true scaffold_1: 4946070-4958390 Capsella rubella
Carub.0001s1395 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4946070-4956069 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370232 5261 Brassicaceae View MSA
123828088 5264 Brassicales-Malvales View MSA
124344761 5266 SBM View MSA
124250577 5268 Malvidae View MSA
124063785 5270 Rosid View MSA
123740423 5271 Pentapetalae View MSA
122790684 5272 Eudicot View MSA
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain