Gene : Carub.0001s1684 C. rubella v1.1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  1684
Name:  ? Carub.0001s1684 Secondary Identifier:  ? PAC:39231313
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1684 0.5kb upstream 0.5kb upstream 5672 true scaffold_1: 5899499-5905170 Capsella rubella
Carub.0001s1684 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5904671-5905170 Capsella rubella
Carub.0001s1684 0.5kb downstream 0.5kb downstream 5672 true scaffold_1: 5898999-5904670 Capsella rubella
Carub.0001s1684 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5898999-5899498 Capsella rubella
Carub.0001s1684 1.0kb upstream 1.0kb upstream 6172 true scaffold_1: 5899499-5905670 Capsella rubella
Carub.0001s1684 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5904671-5905670 Capsella rubella
Carub.0001s1684 1.0kb downstream 1.0kb downstream 6172 true scaffold_1: 5898499-5904670 Capsella rubella
Carub.0001s1684 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5898499-5899498 Capsella rubella
Carub.0001s1684 2.0kb upstream 2.0kb upstream 7172 true scaffold_1: 5899499-5906670 Capsella rubella
Carub.0001s1684 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5904671-5906670 Capsella rubella
Carub.0001s1684 2.0kb downstream 2.0kb downstream 7172 true scaffold_1: 5897499-5904670 Capsella rubella
Carub.0001s1684 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5897499-5899498 Capsella rubella
Carub.0001s1684 5.0kb upstream 5.0kb upstream 10172 true scaffold_1: 5899499-5909670 Capsella rubella
Carub.0001s1684 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5904671-5909670 Capsella rubella
Carub.0001s1684 5.0kb downstream 5.0kb downstream 10172 true scaffold_1: 5894499-5904670 Capsella rubella
Carub.0001s1684 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5894499-5899498 Capsella rubella
Carub.0001s1684 10.0kb upstream 10.0kb upstream 15172 true scaffold_1: 5899499-5914670 Capsella rubella
Carub.0001s1684 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5904671-5914670 Capsella rubella
Carub.0001s1684 10.0kb downstream 10.0kb downstream 15172 true scaffold_1: 5889499-5904670 Capsella rubella
Carub.0001s1684 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5889499-5899498 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376233 5261 Brassicaceae View MSA
123835041 5264 Brassicales-Malvales View MSA
124338426 5266 SBM View MSA
124250449 5268 Malvidae View MSA
124069029 5270 Rosid View MSA
123741406 5271 Pentapetalae View MSA
122770044 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain