Gene : Carub.0001s1204 C. rubella v1.1
Defline:  (1 of 3) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  1204
Name:  ? Carub.0001s1204 Secondary Identifier:  ? PAC:39230016
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1204 0.5kb upstream 0.5kb upstream 1985 true scaffold_1: 4298056-4300040 Capsella rubella
Carub.0001s1204 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4298056-4298555 Capsella rubella
Carub.0001s1204 0.5kb downstream 0.5kb downstream 1985 true scaffold_1: 4298556-4300540 Capsella rubella
Carub.0001s1204 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4300041-4300540 Capsella rubella
Carub.0001s1204 1.0kb upstream 1.0kb upstream 2485 true scaffold_1: 4297556-4300040 Capsella rubella
Carub.0001s1204 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4297556-4298555 Capsella rubella
Carub.0001s1204 1.0kb downstream 1.0kb downstream 2485 true scaffold_1: 4298556-4301040 Capsella rubella
Carub.0001s1204 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4300041-4301040 Capsella rubella
Carub.0001s1204 2.0kb upstream 2.0kb upstream 3485 true scaffold_1: 4296556-4300040 Capsella rubella
Carub.0001s1204 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4296556-4298555 Capsella rubella
Carub.0001s1204 2.0kb downstream 2.0kb downstream 3485 true scaffold_1: 4298556-4302040 Capsella rubella
Carub.0001s1204 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4300041-4302040 Capsella rubella
Carub.0001s1204 5.0kb upstream 5.0kb upstream 6485 true scaffold_1: 4293556-4300040 Capsella rubella
Carub.0001s1204 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4293556-4298555 Capsella rubella
Carub.0001s1204 5.0kb downstream 5.0kb downstream 6485 true scaffold_1: 4298556-4305040 Capsella rubella
Carub.0001s1204 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4300041-4305040 Capsella rubella
Carub.0001s1204 10.0kb upstream 10.0kb upstream 11485 true scaffold_1: 4288556-4300040 Capsella rubella
Carub.0001s1204 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4288556-4298555 Capsella rubella
Carub.0001s1204 10.0kb downstream 10.0kb downstream 11485 true scaffold_1: 4298556-4310040 Capsella rubella
Carub.0001s1204 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4300041-4310040 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381235 5261 Brassicaceae View MSA
123835843 5264 Brassicales-Malvales View MSA
124341582 5266 SBM View MSA
124248925 5268 Malvidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain