Gene : Carub.0001s1201 C. rubella v1.1
Defline:  (1 of 1) 6.3.2.5 - Phosphopantothenate--cysteine ligase / Phosphopantothenoylcysteine synthetase Genomic Order:  1201
Name:  ? Carub.0001s1201 Secondary Identifier:  ? PAC:39226945
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella COA-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1201 0.5kb upstream 0.5kb upstream 2479 true scaffold_1: 4273632-4276110 Capsella rubella
Carub.0001s1201 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4273632-4274131 Capsella rubella
Carub.0001s1201 0.5kb downstream 0.5kb downstream 2479 true scaffold_1: 4274132-4276610 Capsella rubella
Carub.0001s1201 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4276111-4276610 Capsella rubella
Carub.0001s1201 1.0kb upstream 1.0kb upstream 2979 true scaffold_1: 4273132-4276110 Capsella rubella
Carub.0001s1201 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4273132-4274131 Capsella rubella
Carub.0001s1201 1.0kb downstream 1.0kb downstream 2979 true scaffold_1: 4274132-4277110 Capsella rubella
Carub.0001s1201 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4276111-4277110 Capsella rubella
Carub.0001s1201 2.0kb upstream 2.0kb upstream 3979 true scaffold_1: 4272132-4276110 Capsella rubella
Carub.0001s1201 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4272132-4274131 Capsella rubella
Carub.0001s1201 2.0kb downstream 2.0kb downstream 3979 true scaffold_1: 4274132-4278110 Capsella rubella
Carub.0001s1201 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4276111-4278110 Capsella rubella
Carub.0001s1201 5.0kb upstream 5.0kb upstream 6979 true scaffold_1: 4269132-4276110 Capsella rubella
Carub.0001s1201 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4269132-4274131 Capsella rubella
Carub.0001s1201 5.0kb downstream 5.0kb downstream 6979 true scaffold_1: 4274132-4281110 Capsella rubella
Carub.0001s1201 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4276111-4281110 Capsella rubella
Carub.0001s1201 10.0kb upstream 10.0kb upstream 11979 true scaffold_1: 4264132-4276110 Capsella rubella
Carub.0001s1201 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4264132-4274131 Capsella rubella
Carub.0001s1201 10.0kb downstream 10.0kb downstream 11979 true scaffold_1: 4274132-4286110 Capsella rubella
Carub.0001s1201 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4276111-4286110 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361354 5261 Brassicaceae View MSA
123833766 5264 Brassicales-Malvales View MSA
124345147 5266 SBM View MSA
124250863 5268 Malvidae View MSA
124065288 5270 Rosid View MSA
123750270 5271 Pentapetalae View MSA
122791769 5272 Eudicot View MSA
122051236 5273 Angiosperm View MSA
121346014 5274 Embryophyte View MSA
123425902 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain