Gene : Carub.0001s1086 C. rubella v1.1
Defline:  (1 of 53) PTHR32133:SF127 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  1086
Name:  ? Carub.0001s1086 Secondary Identifier:  ? PAC:39228678
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1086 0.5kb upstream 0.5kb upstream 1710 true scaffold_1: 3874385-3876094 Capsella rubella
Carub.0001s1086 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3874385-3874884 Capsella rubella
Carub.0001s1086 0.5kb downstream 0.5kb downstream 1710 true scaffold_1: 3874885-3876594 Capsella rubella
Carub.0001s1086 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3876095-3876594 Capsella rubella
Carub.0001s1086 1.0kb upstream 1.0kb upstream 2210 true scaffold_1: 3873885-3876094 Capsella rubella
Carub.0001s1086 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3873885-3874884 Capsella rubella
Carub.0001s1086 1.0kb downstream 1.0kb downstream 2210 true scaffold_1: 3874885-3877094 Capsella rubella
Carub.0001s1086 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3876095-3877094 Capsella rubella
Carub.0001s1086 2.0kb upstream 2.0kb upstream 3210 true scaffold_1: 3872885-3876094 Capsella rubella
Carub.0001s1086 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3872885-3874884 Capsella rubella
Carub.0001s1086 2.0kb downstream 2.0kb downstream 3210 true scaffold_1: 3874885-3878094 Capsella rubella
Carub.0001s1086 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3876095-3878094 Capsella rubella
Carub.0001s1086 5.0kb upstream 5.0kb upstream 6210 true scaffold_1: 3869885-3876094 Capsella rubella
Carub.0001s1086 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3869885-3874884 Capsella rubella
Carub.0001s1086 5.0kb downstream 5.0kb downstream 6210 true scaffold_1: 3874885-3881094 Capsella rubella
Carub.0001s1086 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3876095-3881094 Capsella rubella
Carub.0001s1086 10.0kb upstream 10.0kb upstream 11210 true scaffold_1: 3864885-3876094 Capsella rubella
Carub.0001s1086 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3864885-3874884 Capsella rubella
Carub.0001s1086 10.0kb downstream 10.0kb downstream 11210 true scaffold_1: 3874885-3886094 Capsella rubella
Carub.0001s1086 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3876095-3886094 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121497394 5273 Angiosperm Singleton cluster - no MSA
122335095 5261 Brassicaceae Singleton cluster - no MSA
123775883 5264 Brassicales-Malvales Singleton cluster - no MSA
124274282 5266 SBM Singleton cluster - no MSA
124129784 5268 Malvidae Singleton cluster - no MSA
123858297 5270 Rosid Singleton cluster - no MSA
123444022 5271 Pentapetalae Singleton cluster - no MSA
122479587 5272 Eudicot Singleton cluster - no MSA
120770753 5274 Embryophyte Singleton cluster - no MSA
122813117 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain