Gene : Carub.0001s1347 C. rubella v1.1
Defline:  (1 of 2) PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Genomic Order:  1347
Name:  ? Carub.0001s1347 Secondary Identifier:  ? PAC:39229746
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1347 0.5kb upstream 0.5kb upstream 3164 true scaffold_1: 4800249-4803412 Capsella rubella
Carub.0001s1347 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4800249-4800748 Capsella rubella
Carub.0001s1347 0.5kb downstream 0.5kb downstream 3164 true scaffold_1: 4800749-4803912 Capsella rubella
Carub.0001s1347 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4803413-4803912 Capsella rubella
Carub.0001s1347 1.0kb upstream 1.0kb upstream 3664 true scaffold_1: 4799749-4803412 Capsella rubella
Carub.0001s1347 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4799749-4800748 Capsella rubella
Carub.0001s1347 1.0kb downstream 1.0kb downstream 3664 true scaffold_1: 4800749-4804412 Capsella rubella
Carub.0001s1347 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4803413-4804412 Capsella rubella
Carub.0001s1347 2.0kb upstream 2.0kb upstream 4664 true scaffold_1: 4798749-4803412 Capsella rubella
Carub.0001s1347 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4798749-4800748 Capsella rubella
Carub.0001s1347 2.0kb downstream 2.0kb downstream 4664 true scaffold_1: 4800749-4805412 Capsella rubella
Carub.0001s1347 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4803413-4805412 Capsella rubella
Carub.0001s1347 5.0kb upstream 5.0kb upstream 7664 true scaffold_1: 4795749-4803412 Capsella rubella
Carub.0001s1347 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4795749-4800748 Capsella rubella
Carub.0001s1347 5.0kb downstream 5.0kb downstream 7664 true scaffold_1: 4800749-4808412 Capsella rubella
Carub.0001s1347 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4803413-4808412 Capsella rubella
Carub.0001s1347 10.0kb upstream 10.0kb upstream 12664 true scaffold_1: 4790749-4803412 Capsella rubella
Carub.0001s1347 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4790749-4800748 Capsella rubella
Carub.0001s1347 10.0kb downstream 10.0kb downstream 12664 true scaffold_1: 4800749-4813412 Capsella rubella
Carub.0001s1347 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4803413-4813412 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361800 5261 Brassicaceae View MSA
123839234 5264 Brassicales-Malvales View MSA
124322585 5266 SBM View MSA
124253817 5268 Malvidae View MSA
124070986 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain