Gene : Carub.0001s1116 C. rubella v1.1
Defline:  (1 of 1) PTHR31062:SF1 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED Genomic Order:  1116
Name:  ? Carub.0001s1116 Secondary Identifier:  ? PAC:39227118
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1116 0.5kb upstream 0.5kb upstream 2120 true scaffold_1: 3972996-3975115 Capsella rubella
Carub.0001s1116 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3974616-3975115 Capsella rubella
Carub.0001s1116 0.5kb downstream 0.5kb downstream 2120 true scaffold_1: 3972496-3974615 Capsella rubella
Carub.0001s1116 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3972496-3972995 Capsella rubella
Carub.0001s1116 1.0kb upstream 1.0kb upstream 2620 true scaffold_1: 3972996-3975615 Capsella rubella
Carub.0001s1116 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3974616-3975615 Capsella rubella
Carub.0001s1116 1.0kb downstream 1.0kb downstream 2620 true scaffold_1: 3971996-3974615 Capsella rubella
Carub.0001s1116 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3971996-3972995 Capsella rubella
Carub.0001s1116 2.0kb upstream 2.0kb upstream 3620 true scaffold_1: 3972996-3976615 Capsella rubella
Carub.0001s1116 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3974616-3976615 Capsella rubella
Carub.0001s1116 2.0kb downstream 2.0kb downstream 3620 true scaffold_1: 3970996-3974615 Capsella rubella
Carub.0001s1116 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3970996-3972995 Capsella rubella
Carub.0001s1116 5.0kb upstream 5.0kb upstream 6620 true scaffold_1: 3972996-3979615 Capsella rubella
Carub.0001s1116 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3974616-3979615 Capsella rubella
Carub.0001s1116 5.0kb downstream 5.0kb downstream 6620 true scaffold_1: 3967996-3974615 Capsella rubella
Carub.0001s1116 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3967996-3972995 Capsella rubella
Carub.0001s1116 10.0kb upstream 10.0kb upstream 11620 true scaffold_1: 3972996-3984615 Capsella rubella
Carub.0001s1116 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3974616-3984615 Capsella rubella
Carub.0001s1116 10.0kb downstream 10.0kb downstream 11620 true scaffold_1: 3962996-3974615 Capsella rubella
Carub.0001s1116 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3962996-3972995 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360550 5261 Brassicaceae View MSA
123840349 5264 Brassicales-Malvales View MSA
124343452 5266 SBM View MSA
124240982 5268 Malvidae View MSA
124062437 5270 Rosid View MSA
123740499 5271 Pentapetalae View MSA
122785607 5272 Eudicot View MSA
122047013 5273 Angiosperm View MSA
121352157 5274 Embryophyte View MSA
123382575 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain