Gene : Carub.0001s1172 C. rubella v1.1
Defline:  (1 of 2) PTHR32093:SF40 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1-RELATED Genomic Order:  1172
Name:  ? Carub.0001s1172 Secondary Identifier:  ? PAC:39229559
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1172 0.5kb upstream 0.5kb upstream 2645 true scaffold_1: 4165854-4168498 Capsella rubella
Carub.0001s1172 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4165854-4166353 Capsella rubella
Carub.0001s1172 0.5kb downstream 0.5kb downstream 2645 true scaffold_1: 4166354-4168998 Capsella rubella
Carub.0001s1172 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4168499-4168998 Capsella rubella
Carub.0001s1172 1.0kb upstream 1.0kb upstream 3145 true scaffold_1: 4165354-4168498 Capsella rubella
Carub.0001s1172 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4165354-4166353 Capsella rubella
Carub.0001s1172 1.0kb downstream 1.0kb downstream 3145 true scaffold_1: 4166354-4169498 Capsella rubella
Carub.0001s1172 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4168499-4169498 Capsella rubella
Carub.0001s1172 2.0kb upstream 2.0kb upstream 4145 true scaffold_1: 4164354-4168498 Capsella rubella
Carub.0001s1172 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4164354-4166353 Capsella rubella
Carub.0001s1172 2.0kb downstream 2.0kb downstream 4145 true scaffold_1: 4166354-4170498 Capsella rubella
Carub.0001s1172 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4168499-4170498 Capsella rubella
Carub.0001s1172 5.0kb upstream 5.0kb upstream 7145 true scaffold_1: 4161354-4168498 Capsella rubella
Carub.0001s1172 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4161354-4166353 Capsella rubella
Carub.0001s1172 5.0kb downstream 5.0kb downstream 7145 true scaffold_1: 4166354-4173498 Capsella rubella
Carub.0001s1172 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4168499-4173498 Capsella rubella
Carub.0001s1172 10.0kb upstream 10.0kb upstream 12145 true scaffold_1: 4156354-4168498 Capsella rubella
Carub.0001s1172 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4156354-4166353 Capsella rubella
Carub.0001s1172 10.0kb downstream 10.0kb downstream 12145 true scaffold_1: 4166354-4178498 Capsella rubella
Carub.0001s1172 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4168499-4178498 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375536 5261 Brassicaceae View MSA
123841495 5264 Brassicales-Malvales View MSA
124351661 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain