Gene : Carub.0001s1178 C. rubella v1.1
Defline:  (1 of 30) PF00234 - Protease inhibitor/seed storage/LTP family (Tryp_alpha_amyl) Genomic Order:  1178
Name:  ? Carub.0001s1178 Secondary Identifier:  ? PAC:39229254
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1178 0.5kb upstream 0.5kb upstream 917 true scaffold_1: 4183493-4184409 Capsella rubella
Carub.0001s1178 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4183910-4184409 Capsella rubella
Carub.0001s1178 0.5kb downstream 0.5kb downstream 917 true scaffold_1: 4182993-4183909 Capsella rubella
Carub.0001s1178 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4182993-4183492 Capsella rubella
Carub.0001s1178 1.0kb upstream 1.0kb upstream 1417 true scaffold_1: 4183493-4184909 Capsella rubella
Carub.0001s1178 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4183910-4184909 Capsella rubella
Carub.0001s1178 1.0kb downstream 1.0kb downstream 1417 true scaffold_1: 4182493-4183909 Capsella rubella
Carub.0001s1178 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4182493-4183492 Capsella rubella
Carub.0001s1178 2.0kb upstream 2.0kb upstream 2417 true scaffold_1: 4183493-4185909 Capsella rubella
Carub.0001s1178 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4183910-4185909 Capsella rubella
Carub.0001s1178 2.0kb downstream 2.0kb downstream 2417 true scaffold_1: 4181493-4183909 Capsella rubella
Carub.0001s1178 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4181493-4183492 Capsella rubella
Carub.0001s1178 5.0kb upstream 5.0kb upstream 5417 true scaffold_1: 4183493-4188909 Capsella rubella
Carub.0001s1178 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4183910-4188909 Capsella rubella
Carub.0001s1178 5.0kb downstream 5.0kb downstream 5417 true scaffold_1: 4178493-4183909 Capsella rubella
Carub.0001s1178 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4178493-4183492 Capsella rubella
Carub.0001s1178 10.0kb upstream 10.0kb upstream 10417 true scaffold_1: 4183493-4193909 Capsella rubella
Carub.0001s1178 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4183910-4193909 Capsella rubella
Carub.0001s1178 10.0kb downstream 10.0kb downstream 10417 true scaffold_1: 4173493-4183909 Capsella rubella
Carub.0001s1178 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4173493-4183492 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379965 5261 Brassicaceae View MSA
123836715 5264 Brassicales-Malvales View MSA
124342159 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain